RNA–Protein interactions for RNA: ENST00000581835.1

PPP4R1-220, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 379 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-220ENST00000581835 SMCO1Q147U7 214 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 ANKRD55Q3KP44 614 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 C2orf83Q53S99 150 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 TRIQKQ629K1 86 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 RBPMS2Q6ZRY4 209 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 LRTM2Q8N967 370 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 TM2D3Q9BRN9 247 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 WFDC10AQ9H1F0 79 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 TUBA4BQ9H853 241 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 HEYLQ9NQ87 328 aaPredicted RBP7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 MRPL36Q9P0J6 103 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 CACFD1Q9UGQ2 172 aa7.7□□□□□ -1.18
PPP4R1-220ENST00000581835 PIGBOS1A0A0B4J2F0 54 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 DUXBA0A1W2PPF3 345 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 NAP1L6A6NFF2 107 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 CEBPZOSA8MTT3 80 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 OR11H12B2RN74 326 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 YIF1AO95070 293 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 SFT2D2O95562 160 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 VAMP1P23763 118 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 OPRK1P41145 380 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 TNFRSF9Q07011 255 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 RBMS2Q15434 407 aaKnown RBP7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 LINC00322Q6ZN03 302 aaPredicted RBP7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 SLC16A13Q7RTY0 426 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 CENPSQ8N2Z9 138 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 DEFB125Q8N687 156 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 SLC24A4Q8NFF2 622 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 OR4X1Q8NH49 305 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 TMEM170AQ8WVE7 144 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 RCHY1Q96PM5 261 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 ZMAT4Q9H898 229 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 HSPB7Q9UBY9 170 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 SMPXQ9UHP9 88 aa7.69□□□□□ -1.18
PPP4R1-220ENST00000581835 KMT2CQ8NEZ4 4911 aaKnown RBP7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 TRAV14DV4A0A0A6YYC5 116 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 IGHV7-4-1A0A0J9YVY3 117 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 A0A1B0GU03 582 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 CHEK1O14757 476 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 TSPAN4O14817 238 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 CLN5O75503 358 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 NDUFB6O95139 128 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 IL7P13232 177 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 PPP1R1AQ13522 171 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 HAGHQ16775 308 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 TOMM20LQ6UXN7 152 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 ZNF600Q6ZNG1 722 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 OR52B4Q8NGK2 314 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 RNASEH2CQ8TDP1 164 aaKnown RBP7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 SPAG8Q99932 426 aaPredicted RBP7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 HIPK2Q9H2X6 1198 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 SRD5A3Q9H8P0 318 aa7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 PUS1Q9Y606 427 aaKnown RBP eCLIP7.68□□□□□ -1.18
PPP4R1-220ENST00000581835 CSMD3Q7Z407 3707 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 IGHV3-49A0A0A0MS15 119 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 LINC00854A0A1B0GVQ3 168 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RPS10-NUDT3A0A1W2PQS6 291 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RBMY1BA6NDE4 496 aaKnown RBP7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RBMY1EA6NEQ0 496 aaKnown RBP7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 PITX3O75364 302 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RBMY1DP0C7P1 496 aaKnown RBP7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 NPY1RP25929 384 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 BTCP35070 178 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 UBE2MP61081 183 aaKnown RBP7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 LAMTOR1Q6IAA8 161 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 NOXA1Q86UR1 476 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 TMEM116Q8NCL8 245 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 OR1S1Q8NH92 325 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 DTD1Q8TEA8 209 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RNF2Q99496 336 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 C7orf50Q9BRJ6 194 aaKnown RBP7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 GINS3Q9BRX5 216 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RHPN1-AS1Q9BWJ2 59 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 RBKSQ9H477 322 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 ZFAND3Q9H8U3 227 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 FLVCR2Q9UPI3 526 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 TMED3Q9Y3Q3 217 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 U3KQ87 197 aa7.67□□□□□ -1.18
PPP4R1-220ENST00000581835 TRAV30A0A087WSZ9 112 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 C9orf170A2RU37 121 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 CENPXA8MT69 81 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 IFNA10P01566 189 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 IGKV1-17P01599 117 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 SLC25A6P12236 298 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 FAM90A2PQ658T7 463 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 PRSS54Q6PEW0 395 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 SPATA25Q9BR10 227 aa7.66□□□□□ -1.18
PPP4R1-220ENST00000581835 IGHV3OR16-13A0A075B7E8 117 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 IGHV3-74A0A0B4J1X5 117 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 FAM90A26D6RGX4 464 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 PLA2G10O15496 165 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 SCGB2A1O75556 95 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 APOHP02749 345 aaPredicted RBP7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 HOXB5P09067 269 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 OR4E1P0C645 316 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 IGLC1P0CG04 106 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 SLC25A4P12235 298 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 RND2P52198 227 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 TIGITQ495A1 244 aa7.65□□□□□ -1.18
PPP4R1-220ENST00000581835 GGNBP1Q5YKI7 109 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms