RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 SLURP1P55000 103 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 H2BFSP57053 126 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 IL15RAQ13261 267 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 FHL3Q13643 280 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 MLANAQ16655 118 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 TREML4Q6UXN2 200 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 TMEM170AQ8WVE7 144 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 SLC35E1Q96K37 410 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 OR4C12Q96R67 309 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 TXN2Q99757 166 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 FNDC4Q9H6D8 234 aaPredicted RBP11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 ZC4H2Q9NQZ6 224 aa11.18□□□□□ -0.62
NPLOC4-218ENST00000574964 NOTCH3Q9UM47 2321 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 NUPL2O15504 423 aaKnown RBP11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 TGOLN2O43493 480 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 SLC25A4P12235 298 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 CXCL3P19876 107 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 CAV2P51636 162 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 PAX9P55771 341 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 CD69Q07108 199 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 PRR31Q5SQ13 230 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 SPSB3Q6PJ21 355 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 SLC16A13Q7RTY0 426 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 LINC00482Q8N8I6 264 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 OR11H7Q8NGC8 314 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 PPP1R1CQ8WVI7 109 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 BSCL2Q96G97 398 aaPredicted RBP11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
NPLOC4-218ENST00000574964 BMPR1BO00238 502 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 OR2C1O95371 312 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 TMEM50AO95807 157 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 METTL15P1P0C7V9 234 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 PET100P0DJ07 73 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 FCGR2BP31994 310 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 GPX4P36969 197 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 OR8G2PQ6IF36 304 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 DCUN1D4Q92564 292 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 ACY3Q96HD9 319 aa11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 ZNF436Q9C0F3 470 aaPredicted RBP11.16□□□□□ -0.62
NPLOC4-218ENST00000574964 TRAV30A0A087WSZ9 112 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 FAM24AA6NFZ4 105 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 E5RGE8 158 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 OVOL1O14753 267 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 CLN5O75503 358 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 DEDDO75618 318 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 RND2P52198 227 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 FAM106AQ4KMX7 169 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 PRSS54Q6PEW0 395 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 TMEM14EPQ6UXP3 125 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 OR10P1Q8NGE3 313 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 OR4X1Q8NH49 305 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 CACNG8Q8WXS5 425 aa11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 DLX4Q92988 240 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 WDR89Q96FK6 387 aaPredicted RBP11.15□□□□□ -0.62
NPLOC4-218ENST00000574964 IGHV3-35A0A0C4DH35 117 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 ZNF320A2RRD8 509 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 MPC2O95563 127 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 STX12Q86Y82 276 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 THAP6Q8TBB0 222 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 ASB13Q8WXK3 278 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 NPIPB3Q92617 1050 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 CHRDL1Q9BU40 450 aa11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 MCRIP2Q9BUT9 160 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 MRPL36Q9P0J6 103 aaKnown RBP11.14□□□□□ -0.63
NPLOC4-218ENST00000574964 SMCO3A2RU48 225 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 F8W735 103 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 YIF1AO95070 293 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 SCAF4O95104 1147 aaKnown RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 CTSGP08311 255 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 GIPP09681 153 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 AKR1C1Q04828 323 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 RELQ04864 619 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 KLF5Q13887 457 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 Q6ZNX1 250 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 GPHB5Q86YW7 130 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 WFDC9Q8NEX5 89 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 OR1S2Q8NGQ3 325 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 ELOVL1Q9BW60 279 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 SLC25A31Q9H0C2 315 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 LYRM2Q9NU23 88 aaPredicted RBP11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 OR5AC2Q9NZP5 309 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 PEMTQ9UBM1 199 aa11.13□□□□□ -0.63
NPLOC4-218ENST00000574964 ZFP92A6NM28 416 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 CCNKO75909 580 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 CST7O76096 145 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 OR10J1P30954 320 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 P2RY1P47900 373 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 RAP2BP61225 183 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 FGL1Q08830 312 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 GAMTQ14353 236 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 ACOT7LQ6ZUV0 252 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 TMEM252Q8N6L7 170 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 TMEM116Q8NCL8 245 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 RCC1LQ96I51 464 aaKnown RBP11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 C11orf1Q9H5F2 150 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 MBD2Q9UBB5 411 aa11.12□□□□□ -0.63
NPLOC4-218ENST00000574964 PMS2P5A8MQ11 134 aa11.11□□□□□ -0.63
NPLOC4-218ENST00000574964 SEC14L6B5MCN3 397 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms