RNA–Protein interactions for RNA: ENST00000568230.5

KNOP1-205, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KNOP1, Length 1,311 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-205ENST00000568230 SDHCQ99643 169 aaPredicted RBP12.84□□□□□ -0.35
KNOP1-205ENST00000568230 WFDC10AQ9H1F0 79 aa12.84□□□□□ -0.35
KNOP1-205ENST00000568230 FNDC4Q9H6D8 234 aaPredicted RBP12.84□□□□□ -0.35
KNOP1-205ENST00000568230 ZMAT4Q9H898 229 aa12.84□□□□□ -0.35
KNOP1-205ENST00000568230 CSMD3Q7Z407 3707 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 DUXBA0A1W2PPF3 345 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 OPRK1P41145 380 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 RBMS2Q15434 407 aaKnown RBP12.83□□□□□ -0.36
KNOP1-205ENST00000568230 LINC00322Q6ZN03 302 aaPredicted RBP12.83□□□□□ -0.36
KNOP1-205ENST00000568230 RBPMS2Q6ZRY4 209 aaKnown RBP12.83□□□□□ -0.36
KNOP1-205ENST00000568230 LRTM2Q8N967 370 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 SLC24A4Q8NFF2 622 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 HEYLQ9NQ87 328 aaPredicted RBP12.83□□□□□ -0.36
KNOP1-205ENST00000568230 MRPL36Q9P0J6 103 aaKnown RBP12.83□□□□□ -0.36
KNOP1-205ENST00000568230 HSPB7Q9UBY9 170 aa12.83□□□□□ -0.36
KNOP1-205ENST00000568230 CEBPZOSA8MTT3 80 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 OR11H12B2RN74 326 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 TSPAN4O14817 238 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 ZNF207O43670 478 aaKnown RBP12.82□□□□□ -0.36
KNOP1-205ENST00000568230 TNFRSF9Q07011 255 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 SMCO1Q147U7 214 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 HAGHQ16775 308 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 ANKRD55Q3KP44 614 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 C2orf83Q53S99 150 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 DEFB125Q8N687 156 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 OR52B4Q8NGK2 314 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 TMEM170AQ8WVE7 144 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 SPAG8Q99932 426 aaPredicted RBP12.82□□□□□ -0.36
KNOP1-205ENST00000568230 STARD9Q9P2P6 4700 aa12.82□□□□□ -0.36
KNOP1-205ENST00000568230 IGHV7-4-1A0A0J9YVY3 117 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 A0A1B0GU03 582 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 NAP1L6A6NFF2 107 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 YIF1AO95070 293 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 NXPH3O95157 252 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 VAMP1P23763 118 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 INPP1P49441 399 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 PPP1R1AQ13522 171 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 TOMM20LQ6UXN7 152 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 ZNF600Q6ZNG1 722 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 CENPSQ8N2Z9 138 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 OR4X1Q8NH49 305 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 RNASEH2CQ8TDP1 164 aaKnown RBP12.81□□□□□ -0.36
KNOP1-205ENST00000568230 SRD5A3Q9H8P0 318 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 SMPXQ9UHP9 88 aa12.81□□□□□ -0.36
KNOP1-205ENST00000568230 CLN5O75503 358 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 TMEM50AO95807 157 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 UBE2MP61081 183 aaKnown RBP12.8□□□□□ -0.36
KNOP1-205ENST00000568230 LAMTOR1Q6IAA8 161 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 SPATA25Q9BR10 227 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 GINS3Q9BRX5 216 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 HIPK2Q9H2X6 1198 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 ZFAND3Q9H8U3 227 aa12.8□□□□□ -0.36
KNOP1-205ENST00000568230 RPS10-NUDT3A0A1W2PQS6 291 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 RBMY1BA6NDE4 496 aaKnown RBP12.79□□□□□ -0.36
KNOP1-205ENST00000568230 RBMY1EA6NEQ0 496 aaKnown RBP12.79□□□□□ -0.36
KNOP1-205ENST00000568230 CHEK1O14757 476 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 PITX3O75364 302 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 NDUFB6O95139 128 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 SFT2D2O95562 160 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 RBMY1DP0C7P1 496 aaKnown RBP12.79□□□□□ -0.36
KNOP1-205ENST00000568230 IL7P13232 177 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 NPY1RP25929 384 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 MLANAQ16655 118 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 RHPN1-AS1Q9BWJ2 59 aa12.79□□□□□ -0.36
KNOP1-205ENST00000568230 PUS1Q9Y606 427 aaKnown RBP eCLIP12.79□□□□□ -0.36
KNOP1-205ENST00000568230 DYNC2H1Q8NCM8 4307 aaKnown RBP12.78□□□□□ -0.36
KNOP1-205ENST00000568230 TRAV14DV4A0A0A6YYC5 116 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 IGKV1-17P01599 117 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 SLC25A6P12236 298 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 BTCP35070 178 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 PRSS54Q6PEW0 395 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 NOXA1Q86UR1 476 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 DTD1Q8TEA8 209 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 RNF2Q99496 336 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 C7orf50Q9BRJ6 194 aaKnown RBP12.78□□□□□ -0.36
KNOP1-205ENST00000568230 RBKSQ9H477 322 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 TMED3Q9Y3Q3 217 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 U3KQ87 197 aa12.78□□□□□ -0.36
KNOP1-205ENST00000568230 RYR3Q15413 4870 aa12.77□□□□□ -0.36
KNOP1-205ENST00000568230 SCGB2A1O75556 95 aa12.77□□□□□ -0.37
KNOP1-205ENST00000568230 SLC25A4P12235 298 aa12.77□□□□□ -0.37
KNOP1-205ENST00000568230 OR1S1Q8NH92 325 aa12.77□□□□□ -0.37
KNOP1-205ENST00000568230 TRAV30A0A087WSZ9 112 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 IGHV3-49A0A0A0MS15 119 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 OR4C46A6NHA9 309 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 IGLC1P0CG04 106 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 BMI1P35226 326 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 RND2P52198 227 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 ATP5IP56385 69 aaPredicted RBP12.76□□□□□ -0.37
KNOP1-205ENST00000568230 FAM90A2PQ658T7 463 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 VSIRQ9H7M9 311 aa12.76□□□□□ -0.37
KNOP1-205ENST00000568230 IGHV3OR16-13A0A075B7E8 117 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 IGHV3-74A0A0B4J1X5 117 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 LINC00854A0A1B0GVQ3 168 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 C9orf170A2RU37 121 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 CENPXA8MT69 81 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 FAM90A26D6RGX4 464 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 IFNA10P01566 189 aa12.75□□□□□ -0.37
KNOP1-205ENST00000568230 ODF3L2Q3SX64 289 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 196.8 ms