RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 OTORQ9NRC9 128 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 KCPQ6ZWJ8 1503 aa2.97□□□□□ -1.93
USP44-208ENST00000552440 COL5A2P05997 1499 aaPredicted RBP2.97□□□□□ -1.93
USP44-208ENST00000552440 IGLV1-50A0A075B6I6 118 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 IGHV3-66A0A0C4DH42 116 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 LINC00862A6NCI5 91 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TLCD2A6NGC4 264 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 LYZL6O75951 148 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 SLC25A14O95258 325 aaPredicted RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 IGHV3-13P01766 116 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 MT-ND4LP03901 98 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 GPX1P07203 203 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 SRP19P09132 144 aaKnown RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 CD7P09564 240 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 LINC00869P0C866 280 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 NFYBP25208 207 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 KRTAP5-9P26371 169 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 RBMXP38159 391 aaKnown RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 NMUP48645 174 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 INSL3P51460 131 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TAS2R20P59543 309 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 FGF12P61328 243 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TMEM244Q5VVB8 128 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 AMMECR1LQ6DCA0 310 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 MORN3Q6PF18 240 aaPredicted RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 SLC25A34Q6PIV7 304 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TEX261Q6UWH6 196 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 LCA10Q71F78 164 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 SCXQ7RTU7 201 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF329Q86UD4 541 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF440Q8IYI8 595 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 OR11G2Q8NGC1 345 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 OR4A5Q8NH83 315 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 RPS4Y2Q8TD47 263 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 MAL2Q969L2 176 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 CMBLQ96DG6 245 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF799Q96GE5 643 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 PSMG3Q9BT73 122 aaPredicted RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF286AQ9HBT8 521 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 C8orf17Q9NRJ1 99 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TP73-AS1Q9UF72 201 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TOPAZ1Q8N9V7 1692 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 QSER1Q2KHR3 1735 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 FMN2Q9NZ56 1722 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ALS2Q96Q42 1657 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 IGKV1D-43A0A0B4J1Z2 117 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 IGKV1-12A0A0C4DH73 117 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ARRDC5A6NEK1 342 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 C9JCJ5 164 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 LY6LH3BQJ8 138 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 M0R143 59 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 SOCS1O15524 211 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF73O43830 326 aaPredicted RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 IGKV1D-12P01611 117 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 HSPB1P04792 205 aaKnown RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 IGLC6P0CF74 106 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TIMM10P62072 90 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 RRN3P1Q2M238 152 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 VMA21Q3ZAQ7 101 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 GLIPR1L1Q6UWM5 242 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TMEM14EPQ6UXP3 125 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 CTAGE3PQ8IX95 158 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 Q8N377 158 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 OR51A4Q8NGJ6 313 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 OR5C1Q8NGR4 320 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 H1FXQ92522 213 aaKnown RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 ZNF414Q96IQ9 312 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 TSSK6Q9BXA6 273 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 NKX6-2Q9C056 277 aaPredicted RBP2.96□□□□□ -1.94
USP44-208ENST00000552440 SCN3BQ9NY72 215 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 CKLFQ9UBR5 152 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 MOB4Q9Y3A3 225 aa2.96□□□□□ -1.94
USP44-208ENST00000552440 CLTCL1P53675 1640 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 TRPM3Q9HCF6 1732 aaPredicted RBP2.95□□□□□ -1.94
USP44-208ENST00000552440 TAX1BP3O14907 124 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 SCO1O75880 301 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 CGAP01215 116 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 PAEPP09466 180 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 CASP1P29466 404 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 ZNF80P51504 273 aaPredicted RBP2.95□□□□□ -1.94
USP44-208ENST00000552440 ZNF136P52737 540 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 BSPH1Q075Z2 132 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 C1orf140Q5VVS0 124 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 SLC25A42Q86VD7 318 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 H1FOOQ8IZA3 346 aaPredicted RBP2.95□□□□□ -1.94
USP44-208ENST00000552440 RMI2Q96E14 147 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 ZC2HC1AQ96GY0 325 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 PYGO2Q9BRQ0 406 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 TUBA4BQ9H853 241 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 EFCAB1Q9HAE3 211 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 SCRT2Q9NQ03 307 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 CSAG2Q9Y5P2 127 aa2.95□□□□□ -1.94
USP44-208ENST00000552440 LRRC37A3O60309 1634 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 IGHV3OR15-7A0A075B7D8 119 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 IGHV7-4-1A0A0J9YVY3 117 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 LOC100130705A0A1B0GUX0 176 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 TMEM212A6NML5 194 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 SRRM5B3KS81 715 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 NPFFO15130 113 aa2.94□□□□□ -1.94
USP44-208ENST00000552440 RBFOX2O43251 390 aaKnown RBP eCLIP2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms