RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 C9JCJ5 164 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 BUB1B-PAK6H3BSN5 160 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 CRYGBP07316 175 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 C8orf88P0DMB2 117 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 PPIAL4GP0DN37 164 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 TAS2R45P59539 299 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 ZNF90Q03938 601 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 TEX45Q8NA69 505 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 SGMS2Q8NHU3 365 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 FAM167A-AS1Q96KT0 104 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 CLEC7AQ9BXN2 247 aa14.89□□□□□ -0.03
PRPF40B-208ENST00000548436 IGHV1-3A0A0C4DH29 117 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 LY6HO94772 140 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 FABP4P15090 132 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 CRYBB3P26998 211 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 PRSS8Q16651 343 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 RUSC1-AS1Q66K80 236 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 OR10G8Q8NGN5 311 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 EAF1Q96JC9 268 aaPredicted RBP14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 SLC25A2Q9BXI2 301 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 DNAJC4Q9NNZ3 241 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 INSIG2Q9Y5U4 225 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 GGTLC3B5MD39 225 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 COX7A1P24310 79 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 CDPF1Q6NVV7 123 aa14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 MRPL32Q9BYC8 188 aaKnown RBP14.88□□□□□ -0.03
PRPF40B-208ENST00000548436 A0A0U1RQK1 487 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 TCRBV4S1A1TA0A5B7 111 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 ZNF320A2RRD8 509 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 MFAP2P55001 183 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 HCP5Q6MZN7 132 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 TMEM183AQ8IXX5 376 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 THAP8Q8NA92 274 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 BEND2Q8NDZ0 799 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 CHODLQ9H9P2 273 aa14.87□□□□□ -0.03
PRPF40B-208ENST00000548436 HRNRQ86YZ3 2850 aaPredicted RBP14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 APELAP0DMC3 54 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 RPL15P61313 204 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 TNXAQ16473 311 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 PATE2Q6UY27 113 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 C19orf35Q6ZS72 473 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 MMD2Q8IY49 270 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 OR1P1Q8NH06 330 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 C8orf46Q8TAG6 207 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 HIST1H2BLQ99880 126 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 SIGLEC9Q9Y336 463 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 LY96Q9Y6Y9 160 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 XKRY2A2RUG3 117 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 HELTA6NFD8 242 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 LINC00587B1AMM8 73 aa14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 SUMO1P63165 101 aaKnown RBP14.86□□□□□ -0.03
PRPF40B-208ENST00000548436 SLC17A3O00476 420 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 RBP4P02753 201 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 RPL27AP46776 148 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 CENPWQ5EE01 88 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 COA6Q5JTJ3 125 aaKnown RBP14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 PVRIGQ6DKI7 326 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 UNQ6494/PRO21346Q6UXR6 183 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 OR8B3Q8NGG8 313 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 OR8B2Q96RD0 313 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 RNF2Q99496 336 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 A0A1W2PRE2 83 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 COX7A2P2O60397 106 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 OR5I1Q13606 314 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 OR5AU1Q8NGC0 362 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 MISP3Q96FF7 219 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 ZNF355PQ9NSJ1 428 aa14.85□□□□□ -0.03
PRPF40B-208ENST00000548436 C22orf46C9J442 243 aa14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 CRYGCP07315 174 aa14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 COMPP49747 757 aaPredicted RBP14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 LGALS4P56470 323 aa14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 C10orf113Q5VZT2 155 aa14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 ONECUT1Q9UBC0 465 aa14.84□□□□□ -0.03
PRPF40B-208ENST00000548436 LY6LH3BQJ8 138 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 PYYP10082 97 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 GNG4P50150 75 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 UBE2L3P68036 154 aaKnown RBP14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 LDLRAD2Q5SZI1 272 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 LY6G5BQ8NDX9 201 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 RPEQ96AT9 228 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 PACRGQ96M98 296 aaPredicted RBP14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 PFDN5Q99471 154 aa14.83□□□□□ -0.03
PRPF40B-208ENST00000548436 COL6A6A6NMZ7 2263 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 PDLIM4P50479 330 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 CTAG1AP78358 180 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 PPP1R27Q86WC6 154 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 OR1L4Q8NGR5 311 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 BTF3L4Q96K17 158 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 RAB1BQ9H0U4 201 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 IL36BQ9NZH7 164 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 TRAPPC1Q9Y5R8 145 aa14.83□□□□□ -0.04
PRPF40B-208ENST00000548436 CHD8Q9HCK8 2581 aa14.82□□□□□ -0.04
PRPF40B-208ENST00000548436 MOSP00540 346 aa14.82□□□□□ -0.04
PRPF40B-208ENST00000548436 SELENOTP62341 195 aa14.82□□□□□ -0.04
PRPF40B-208ENST00000548436 FBXL15Q9H469 300 aa14.82□□□□□ -0.04
PRPF40B-208ENST00000548436 TEX22C9J3V5 150 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 AMBPP02760 352 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 LIPFP07098 398 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 ERVFC1-1P60608 527 aa14.81□□□□□ -0.04
PRPF40B-208ENST00000548436 ETFRF1Q6IPR1 90 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms