RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 PIEZO2Q9H5I5 2752 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 KBTBD11-OT1A0A1B0GTJ5 212 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 TMPRSS3P57727 454 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 TNXAQ16473 311 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 OR4A47Q6IF82 309 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RNASEKQ6P5S7 137 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 TMEM136Q6ZRR5 245 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RBMXL3Q8N7X1 1067 aaKnown RBP10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 ZNF439Q8NDP4 499 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 CCL13Q99616 98 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 CDC42EP3Q9UKI2 254 aa10.24□□□□□ -0.77
SFSWAP-208ENST00000539506 RIF1Q5UIP0 2472 aaKnown RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 IGKV1OR2-108A0A075B7D4 117 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 APELAP0DMC3 54 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 USF1P22415 310 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 FOXA3P55318 350 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 STUMQ69YW2 141 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 IGFL3Q6UXB1 125 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 NIT1Q86X76 327 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 SLC24A4Q8NFF2 622 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 OR10W1Q8NGF6 305 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 TSKUQ8WUA8 353 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 GAFA1Q96PS6 74 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 ZFP30Q9Y2G7 519 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 LSM4Q9Y4Z0 139 aaKnown RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 GGTLC3B5MD39 225 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 CORTO00230 105 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 IGLC2P0DOY2 106 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 IGLC3P0DOY3 106 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 NPY1RP25929 384 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 CEACAM8P31997 349 aaPredicted RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 GATA4P43694 442 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 RHOBP62745 196 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 IGF2-ASQ6U949 168 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 Q6ZS92 163 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 LYG1Q8N1E2 194 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 ZCCHC24Q8N2G6 241 aaKnown RBP10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 BORCS7Q96B45 105 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 PMCHL2Q9BQD1 86 aa10.23□□□□□ -0.77
SFSWAP-208ENST00000539506 C15orf61A6NNL5 157 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 FCN3O75636 299 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 TOX4O94842 621 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 PYYP10082 97 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 IBA57Q5T440 356 aaKnown RBP10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 PPP1R35Q8TAP8 253 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 RAB1CQ92928 201 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 RNF2Q99496 336 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 NABP2Q9BQ15 211 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 SLC35D1Q9NTN3 355 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 SRRM4A7MD48 611 aaKnown RBP10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 ZNF324O75467 553 aaPredicted RBP10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 IGKV1-16P04430 117 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 MFAP2P55001 183 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 SSBP2P81877 361 aaPredicted RBP10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 TIGITQ495A1 244 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 C1orf185Q5T7R7 199 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 ASCL2Q99929 193 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 TMEM14BQ9NUH8 114 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 IDI2-AS1Q9NZ38 188 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 SPATA12Q7Z6I5 190 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 ZNF503Q96F45 646 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 ENY2Q9NPA8 101 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 TECRQ9NZ01 308 aaKnown RBP10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 RNF7Q9UBF6 113 aa10.22□□□□□ -0.77
SFSWAP-208ENST00000539506 SNAI2O43623 268 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 APCSP02743 223 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 GNG5P63218 68 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 TNFAIP6P98066 277 aaPredicted RBP10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 TMEM249Q2WGJ8 235 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 OR4S2Q8NH73 311 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 OR2T6Q8NHC8 308 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 KCNS1Q96KK3 526 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 SFXN3Q9BWM7 321 aa10.21□□□□□ -0.77
SFSWAP-208ENST00000539506 IGHV3-21A0A0B4J1V1 117 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 CTRLP40313 264 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 REG1BP48304 166 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF138P52744 262 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 OR4B1Q8NGF8 309 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 UQCR10Q9UDW1 63 aa10.21□□□□□ -0.78
SFSWAP-208ENST00000539506 TRGV8A0A0C4DH27 118 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 GDF5OSQ5U4N7 250 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 EBLN2Q6P2I7 272 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 FOXA2Q9Y261 457 aaPredicted RBP10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 MPDU1O75352 247 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 HSBP1O75506 76 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CT45A6P0DMU7 189 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CT45A5P0DMU8 189 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CT45A7P0DMV0 189 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CD40P25942 277 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF137PP52743 207 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CX3CL1P78423 397 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 CCL8P80075 99 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 ZNF788Q6ZQV5 615 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 OR2D3Q8NGH3 330 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 IL19Q9UHD0 177 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 TRGV10A0A0A0MS01 117 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 M0R2Z0 102 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 ITGB1BP1O14713 200 aa10.2□□□□□ -0.78
SFSWAP-208ENST00000539506 LINC00869P0C866 280 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms