RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 RPRMQ9NS64 109 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 C17orf112F2Z3M2 114 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 AGPAT2O15120 278 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 CD5LO43866 347 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 APOC3P02656 99 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 BLOC1S1P78537 153 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SPNS3Q6ZMD2 512 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TTC9CQ8N5M4 171 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TNFRSF19Q9NS68 423 aa16.01■□□□□ 0.15
TNFRSF1A-205ENST00000534885 CORTO00230 105 aa16■□□□□ 0.15
TNFRSF1A-205ENST00000534885 MT-CO2P00403 227 aa16■□□□□ 0.15
TNFRSF1A-205ENST00000534885 ECSCRQ19T08 205 aa16■□□□□ 0.15
TNFRSF1A-205ENST00000534885 FFAR4Q5NUL3 377 aa16■□□□□ 0.15
TNFRSF1A-205ENST00000534885 OR5T1Q8NG75 326 aa16■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RAB2AP61019 212 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 C9orf152Q5JTZ5 239 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 MIC13Q5XKP0 118 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 BPIFCQ8NFQ6 507 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 NPIPB3Q92617 1050 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TMUB1Q9BVT8 246 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RND2P52198 227 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 BLCAPP62952 87 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 FAM122CQ6P4D5 195 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 Q6YL49 198 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 LURAP1LQ8IV03 231 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 FANCD2OSQ96PS1 177 aa15.99■□□□□ 0.15
TNFRSF1A-205ENST00000534885 G3V318 75 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 I3L2K1 104 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TMEM41BQ5BJD5 291 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 ETFRF1Q6IPR1 90 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 ATRAIDQ6UW56 229 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 UNQ5815/PRO19632Q6UWF5 114 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 MARC2Q969Z3 335 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 PXMP4Q9Y6I8 212 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 M0QZK8 103 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 B2MP61769 119 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 GCSAMLQ5JQS6 135 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 Q6ZS46 218 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 C16orf82Q7Z2V1 217 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 YAE1D1Q9NRH1 226 aa15.98■□□□□ 0.15
TNFRSF1A-205ENST00000534885 IGLV11-55A0A075B6I3 123 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 A0A1B0GV50 99 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 K7EIM0 57 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 OR10J1P30954 320 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 ZNF726P1Q15940 193 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 UQCC3Q6UW78 93 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RPP25LQ8N5L8 163 aaKnown RBP15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 OR1L6Q8NGR2 347 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 LYPD6BQ8NI32 183 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 LINC00527Q9UJ94 153 aa15.97■□□□□ 0.15
TNFRSF1A-205ENST00000534885 HOXA3O43365 443 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 EIF3GO75821 320 aaKnown RBP eCLIP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 YIF1AO95070 293 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 DEFA5Q01523 94 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RAB31Q13636 194 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SSX7Q7RTT5 188 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 STPG3Q8N7X2 389 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 OR5R1Q8NH85 324 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 PRDM13Q9H4Q3 707 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 FLNBO75369 2602 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 IGKV1D-37A0A075B6S9 117 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RAB19A4D1S5 217 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 NUPL2O15504 423 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 GATA2P23769 480 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 DPPA3Q6W0C5 159 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 TMEM116Q8NCL8 245 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 FAM110DQ8TAY7 271 aaPredicted RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 RCC1LQ96I51 464 aaKnown RBP15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SMR3AQ99954 134 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 SLC45A2Q9UMX9 530 aa15.96■□□□□ 0.15
TNFRSF1A-205ENST00000534885 BTBD17A6NE02 478 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 DNASE2O00115 360 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 IGHG2P01859 326 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 H2AFB1P0C5Y9 115 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 RPL29P47914 159 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 AKIRIN2Q53H80 203 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 VPREB3Q9UKI3 123 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TSPAN15O95858 294 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SRP14P37108 136 aaKnown RBP15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 PRR20EP86478 221 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 PRR20CP86479 221 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 PRR20DP86480 221 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 PRR20BP86481 221 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 PRR20AP86496 221 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 TEX29Q8N6K0 151 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 THAP8Q8NA92 274 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 OR10G4Q8NGN3 311 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 OR10G9Q8NGN4 311 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 OR10G7Q8NGN6 311 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 GSX1Q9H4S2 264 aaPredicted RBP15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 S4R3C0 116 aa15.95■□□□□ 0.14
TNFRSF1A-205ENST00000534885 ZFP92A6NM28 416 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 LINC00869P0C866 280 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 ZNF90Q03938 601 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SLC35E3Q7Z769 313 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SIGLECL1Q8N7X8 197 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SFT2D1Q8WV19 159 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SLC39A9Q9NUM3 307 aa15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 ANK3Q12955 4377 aaKnown RBP15.94■□□□□ 0.14
TNFRSF1A-205ENST00000534885 SOX15O60248 233 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms