RNA–Protein interactions for RNA: ENST00000532457.5

PACSIN3-209, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 5

Gene PACSIN3, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-209ENST00000532457 CENPVQ7Z7K6 275 aaPredicted RBP17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 ESM1Q9NQ30 184 aa17.21■□□□□ 0.35
PACSIN3-209ENST00000532457 IGLV11-55A0A075B6I3 123 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 FNDC10F2Z333 226 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 SOX15O60248 233 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 MT-CO2P00403 227 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 NMBP08949 121 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 CLLU1Q5K131 121 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 GNPNAT1Q96EK6 184 aaPredicted RBP17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 NOL4LQ96MY1 436 aaPredicted RBP17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 NPCDR1Q9BY65 106 aa17.2■□□□□ 0.34
PACSIN3-209ENST00000532457 TRIM77I1YAP6 450 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 K7EIM0 57 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 FHITP49789 147 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 SULT1A2P50226 295 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 CRIP2P52943 208 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 DEFA5Q01523 94 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 TMEM182Q6ZP80 229 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 TMEM144Q7Z5S9 345 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 NPIPB3Q92617 1050 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 VSIRQ9H7M9 311 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 IGF1P05019 195 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 EIF5AL1Q6IS14 154 aaKnown RBP17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 SLC35E3Q7Z769 313 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 FAM110DQ8TAY7 271 aaPredicted RBP17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 ACY3Q96HD9 319 aa17.19■□□□□ 0.34
PACSIN3-209ENST00000532457 AKR1C1Q04828 323 aa17.18■□□□□ 0.34
PACSIN3-209ENST00000532457 TRAV41A0A0B4J266 112 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 LINC00862A6NCI5 91 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 NDUFB8O95169 186 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 RNASE1P07998 156 aaKnown RBP17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 RAB14P61106 215 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 TMEM95Q3KNT9 176 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 TEPPQ6URK8 271 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 PSMG3Q9BT73 122 aaPredicted RBP17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 IGKV1D-37A0A075B6S9 117 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 ACSM6Q6P461 480 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 RNF141Q8WVD5 230 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 GGTLC1Q9BX51 225 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 S4R3C0 116 aa17.17■□□□□ 0.34
PACSIN3-209ENST00000532457 CORTO00230 105 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 AGPAT2O15120 278 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 RND2P52198 227 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 RPL15P61313 204 aaKnown RBP17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 KLK9Q2XQG4 91 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 OR1L6Q8NGR2 347 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 SLC35E1Q96K37 410 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 TMEM68Q96MH6 324 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 KLK9Q9UKQ9 250 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 TIMM9Q9Y5J7 89 aa17.16■□□□□ 0.34
PACSIN3-209ENST00000532457 OR2J3O76001 311 aa17.15■□□□□ 0.34
PACSIN3-209ENST00000532457 CAMLGP49069 296 aa17.15■□□□□ 0.34
PACSIN3-209ENST00000532457 TMEM116Q8NCL8 245 aa17.15■□□□□ 0.34
PACSIN3-209ENST00000532457 CXorf58Q96LI9 332 aa17.15■□□□□ 0.34
PACSIN3-209ENST00000532457 MPDU1O75352 247 aa17.14■□□□□ 0.34
PACSIN3-209ENST00000532457 PPIFP30405 207 aaKnown RBP17.14■□□□□ 0.34
PACSIN3-209ENST00000532457 MIC13Q5XKP0 118 aa17.14■□□□□ 0.34
PACSIN3-209ENST00000532457 ZNF702PQ9H963 129 aa17.14■□□□□ 0.34
PACSIN3-209ENST00000532457 SLC45A2Q9UMX9 530 aa17.14■□□□□ 0.34
PACSIN3-209ENST00000532457 TRBV9A0A0B4J1U6 114 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF705EA8MWA4 302 aaPredicted RBP17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 CRYBA1P05813 215 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 LINC00869P0C866 280 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 GATA2P23769 480 aaPredicted RBP17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 OR10J1P30954 320 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 ELLP55199 621 aaPredicted RBP17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 ETFRF1Q6IPR1 90 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 THAP8Q8NA92 274 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 MS4A10Q96PG2 267 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 RPRMQ9NS64 109 aa17.14■□□□□ 0.33
PACSIN3-209ENST00000532457 MFSD2BA6NFX1 497 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 YIF1AO95070 293 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 SERF2P84101 59 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 GCSAMLQ5JQS6 135 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF709Q8N972 641 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 FBXL7Q9UJT9 491 aa17.13■□□□□ 0.33
PACSIN3-209ENST00000532457 TEX46H3BTG2 121 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF90Q03938 601 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 FFAR4Q5NUL3 377 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 PRIMA1Q86XR5 153 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 ZNF355PQ9NSJ1 428 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 FAM181BA6NEQ2 426 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 F8W735 103 aaPredicted RBP17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 AP4M1O00189 453 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 IGHV3-23P01764 117 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 RAB2AP61019 212 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 PXMP4Q9Y6I8 212 aa17.12■□□□□ 0.33
PACSIN3-209ENST00000532457 UMAD1C9J7I0 102 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 EIF3GO75821 320 aaKnown RBP eCLIP17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRR20EP86478 221 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRR20CP86479 221 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRR20DP86480 221 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRR20BP86481 221 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRR20AP86496 221 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 CFHR3Q02985 330 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 AKR1C8PQ5T2L2 129 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 BPIFCQ8NFQ6 507 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 OR4X1Q8NH49 305 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 FAM213BQ8TBF2 198 aa17.11■□□□□ 0.33
PACSIN3-209ENST00000532457 PRSS22Q9GZN4 317 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms