RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 PPP3R1P63098 170 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 PITPNAQ00169 270 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 EMX1Q04741 257 aaPredicted RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 TPBGQ13641 420 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 KIAA0087Q14695 138 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 KISS1Q15726 138 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 SSX1Q16384 188 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 SMIM21Q3B7S5 101 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 SPIN3Q5JUX0 258 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 FAM27D1Q5T7N8 215 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 UBE2UQ5VVX9 321 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 LCN12Q6JVE5 192 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 Q6P435 159 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 CNIH2Q6PI25 160 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ZNF773Q6PK81 442 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TMEM91Q6ZNR0 172 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TCF23Q7RTU1 214 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 SLC36A1Q7Z2H8 476 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 CAMK2N1Q7Z7J9 78 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 LINC01551Q86U37 167 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 LYPD6Q86Y78 171 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TGIF2LXQ8IUE1 241 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 Q8IYB0 196 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 PUSL1Q8N0Z8 303 aaKnown RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 NECAP1Q8NC96 275 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 PXT1Q8NFP0 134 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 OR4M2Q8NGB6 313 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 OR4D6Q8NGJ1 314 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 OR10G9Q8NGN4 311 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 OR5H6Q8NGV6 325 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 OR10K1Q8NGX5 313 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TNFAIP8L1Q8WVP5 186 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 CPNE2Q96FN4 548 aaPredicted RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 RNF185Q96GF1 192 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 PFDN5Q99471 154 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 GPER1Q99527 375 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 MGLLQ99685 303 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 HMG20AQ9NP66 347 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ISYNA1Q9NPH2 558 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 TMEM138Q9NPI0 162 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 RASL12Q9NYN1 266 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 RPUSD1Q9UJJ7 312 aaKnown RBP2.48□□□□□ -2.01
CD44-219ENST00000525685 PSG11Q9UQ72 335 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ALG5Q9Y673 324 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ROS1P08922 2347 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 AKAP6Q13023 2319 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ITPR3Q14573 2671 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 MED13LQ71F56 2210 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 RTTNQ86VV8 2226 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 ITPR2Q14571 2701 aa2.48□□□□□ -2.01
CD44-219ENST00000525685 LRBAP50851 2863 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ARID1AO14497 2285 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 A0A0G2JLM5 398 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 KIR2DS1A0A191URI9 304 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 TMEM213A2RRL7 107 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 C12orf77C9JDV5 145 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 RNASEK-C17orf49H0YIS7 233 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SMLR1H3BR10 107 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SIRPB1O00241 398 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CDRT1O95170 752 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 OR2H2O95918 312 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CYB5AP00167 134 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 CCL3L1P16619 93 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 PSMA1P25786 263 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 PAX6P26367 422 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 PSMB9P28065 219 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 HLA-DMAP28067 261 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 BTCP35070 178 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ZNF93P35789 620 aaPredicted RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 SRP14P37108 136 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 AKR1D1P51857 326 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 FGF8P55075 233 aaPredicted RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 CAV3P56539 151 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 FGF12P61328 243 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 FABP5Q01469 135 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 PRB3Q04118 309 aaPredicted RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 EDDM3AQ14507 147 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 PSG5Q15238 335 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SLC9A3R2Q15599 337 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 TRAM1Q15629 374 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 VAMP3Q15836 100 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 NEDD8Q15843 81 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 PIGYQ3MUY2 71 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ACSM3Q53FZ2 586 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 HSD17B12Q53GQ0 312 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 C5orf47Q569G3 176 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 COA6Q5JTJ3 125 aaKnown RBP2.47□□□□□ -2.01
CD44-219ENST00000525685 DNLZQ5SXM8 178 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 GLIPR1L1Q6UWM5 242 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ASCL4Q6XD76 172 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 SAXO1Q8IYX7 474 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 ZFP82Q8N141 532 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 JAGN1Q8N5M9 183 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 MS4A15Q8N5U1 240 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 TPRX1Q8N7U7 411 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 LY6G5BQ8NDX9 201 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 OR4C5Q8NGB2 326 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 OR4S1Q8NGB4 309 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 OR5D14Q8NGL3 314 aa2.47□□□□□ -2.01
CD44-219ENST00000525685 KCNG3Q8TAE7 436 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 144.5 ms