RNA–Protein interactions for RNA: ENST00000519895.5

MCF2-208, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,346 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-208ENST00000519895 DFFBO76075 338 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TOMM40O96008 361 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SAA1P0DJI8 122 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 DLK1P80370 383 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 IL18Q14116 193 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SMCO1Q147U7 214 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 MMDQ15546 238 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C1orf194Q5T5A4 169 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 LYG2Q86SG7 212 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TBC1D26Q86UD7 250 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 ZNF695Q8IW36 515 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SPAG16Q8N0X2 631 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 MAPK1IP1LQ8NDC0 245 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR4X1Q8NH49 305 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 OR51H1Q8NH63 302 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SUN5Q8TC36 379 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 MRGPRFQ96AM1 343 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 RAB40CQ96S21 281 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 SEC22CQ9BRL7 303 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 HDHD3Q9BSH5 251 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 MARVELD1Q9BSK0 173 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C11orf1Q9H5F2 150 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 C5orf66Q9H5L9 145 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 TMEM231Q9H6L2 316 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 GPN1Q9HCN4 374 aaPredicted RBP2.19□□□□□ -2.06
MCF2-208ENST00000519895 CCL28Q9NRJ3 127 aa2.19□□□□□ -2.06
MCF2-208ENST00000519895 PLECQ15149 4684 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 MSGN1A6NI15 193 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 MARCH11A6NNE9 402 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 A8MTW9 85 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 H7C2Y5 167 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 CD3DP04234 171 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 SERPINE2P07093 398 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 SULT1A3P0DMM9 295 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 SULT1A4P0DMN0 295 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 MYOD1P15172 320 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 AKR1C4P17516 323 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 LPAR6P43657 344 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 RPL30P62888 115 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 ERHP84090 104 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 DGCR2P98153 550 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 FXYD3Q14802 87 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 ABCA11PQ4W5N1 156 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TRIQKQ629K1 86 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 BATF2Q8N1L9 274 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TPRX1Q8N7U7 411 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 OR5AU1Q8NGC0 362 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 ZNF502Q8TBZ5 544 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 GLYATL2Q8WU03 294 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TCTEX1D2Q8WW35 142 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 SRSF12Q8WXF0 261 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 DCUN1D4Q92564 292 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TMEM230Q96A57 120 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 GRAMD2BQ96HH9 432 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 OR10C1Q96KK4 312 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 GPHA2Q96T91 129 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 NMES1Q9C002 83 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 HIPK2Q9H2X6 1198 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 ZNF230Q9UIE0 474 aaPredicted RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 UFC1Q9Y3C8 167 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TEX50A0A1B0GTY4 177 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 C15orf62A8K5M9 175 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 GGCTO75223 188 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 DEDDO75618 318 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 CA2P00918 260 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 IL7P13232 177 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 MDKP21741 143 aaPredicted RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 BTCP35070 178 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 GNG10P50151 68 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 KRTAP10-3P60369 221 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TSPAN5P62079 268 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 MXD1Q05195 221 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 RPL39P5Q59GN2 51 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 UBAC2Q8NBM4 344 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 OR4D5Q8NGN0 318 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 RFESDQ8TAC1 157 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 IL17DQ8TAD2 202 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 C17orf50Q8WW18 174 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TRGV9Q99603 122 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TPPP3Q9BW30 176 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 SSBP4Q9BWG4 385 aaPredicted RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 ZNF430Q9H8G1 570 aaPredicted RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 SRD5A3Q9H8P0 318 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 KCNIP2Q9NS61 270 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 MRPL27Q9P0M9 148 aaKnown RBP2.18□□□□□ -2.06
MCF2-208ENST00000519895 WSB1Q9Y6I7 421 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 FRAS1Q86XX4 4008 aa2.18□□□□□ -2.06
MCF2-208ENST00000519895 TCRBV4S1A1TA0A5B7 111 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 CBY3A6NI87 242 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 SRRM4A7MD48 611 aaKnown RBP2.17□□□□□ -2.06
MCF2-208ENST00000519895 B5MCH6 92 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 I3L2K1 104 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 K7EIL1 84 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 BET1O15155 118 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ATP6V0E1O15342 81 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 LYRM1O43325 122 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 SPRY2O43597 315 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 ZNF253O75346 499 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 MPDU1O75352 247 aa2.17□□□□□ -2.06
MCF2-208ENST00000519895 IGKV1-39P01597 117 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms