RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 RCVRNP35243 200 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 DEFB1P60022 68 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 NANOS2P60321 138 aaKnown RBP6.3□□□□□ -1.4
PABPC1-202ENST00000517403 SPCS2Q15005 226 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 BSXQ3C1V8 233 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 LEMD1Q68G75 181 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 RBPMS2Q6ZRY4 209 aaKnown RBP6.3□□□□□ -1.4
PABPC1-202ENST00000517403 Q6ZWC4 215 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 OR13C8Q8NGS7 320 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 OR6F1Q8NGZ6 308 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 PINX1Q96BK5 328 aaKnown RBP6.3□□□□□ -1.4
PABPC1-202ENST00000517403 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
PABPC1-202ENST00000517403 DNAH6Q9C0G6 4158 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 A0A087WXM4 84 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 K7EMT4 169 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 DFFBO76075 338 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 JTBO76095 146 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 LY6G6CO95867 125 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 PIGPP57054 158 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 RND3P61587 244 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 MEF2DQ14814 521 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 THOC7Q6I9Y2 204 aaKnown RBP6.29□□□□□ -1.4
PABPC1-202ENST00000517403 SPSB3Q6PJ21 355 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 CEMP1Q6PRD7 247 aaPredicted RBP6.29□□□□□ -1.4
PABPC1-202ENST00000517403 Q8NAQ8 132 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 TMEM116Q8NCL8 245 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 TMEM230Q96A57 120 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 PRNDQ9UKY0 176 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 TP53TG1Q9Y2A0 90 aa6.29□□□□□ -1.4
PABPC1-202ENST00000517403 LOC102723971A0A1B0GUV8 181 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 PGPEP1LA6NFU8 196 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 KNCNA6PVL3 124 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 CTDSP2O14595 271 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 SNAPC5O75971 98 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 CD74P04233 296 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 RBMY1A1P0DJD3 496 aaKnown RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 RBMY1CP0DJD4 496 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 UCP1P25874 307 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 ETV6P41212 452 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 PTTG1IPP53801 180 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 HSPE1P61604 102 aaKnown RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 SRSF3P84103 164 aaKnown RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 RBMY1FQ15415 496 aaKnown RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 TCF24Q7RTU0 167 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 H2BFWTQ7Z2G1 175 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 NUDT10Q8NFP7 164 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 MARCH1Q8TCQ1 289 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 NUDT11Q96G61 164 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 ATP6V0BQ99437 205 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 RTBDNQ9BSG5 229 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 SCPEP1Q9HB40 452 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 FAM212BQ9NTI7 297 aaPredicted RBP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 EXTL2Q9UBQ6 330 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 MTFP1Q9UDX5 166 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 PUS1Q9Y606 427 aaKnown RBP eCLIP6.28□□□□□ -1.4
PABPC1-202ENST00000517403 PCLOQ9Y6V0 5065 aa6.28□□□□□ -1.4
PABPC1-202ENST00000517403 KIR2DL5BA0A0G2JN68 375 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 KIR2DL5BA0A0G2JPC4 375 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 OR4C46A6NHA9 309 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 INS-IGF2F8WCM5 200 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 K7EQG2 157 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 TNFAIP8O95379 198 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 TMEM50AO95807 157 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 OR5AC1P0C628 307 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 BMI1P35226 326 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 ALDH3B2P48448 385 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 MFAP4P55083 255 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 DEFB131AP59861 70 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 RBMS2Q15434 407 aaKnown RBP6.27□□□□□ -1.41
PABPC1-202ENST00000517403 USF2Q15853 346 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-202ENST00000517403 TIGITQ495A1 244 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 AARDQ4LEZ3 155 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 GPR107Q5VW38 600 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 HSD17B13Q7Z5P4 300 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-202ENST00000517403 TRPT1Q86TN4 253 aaKnown RBP6.27□□□□□ -1.41
PABPC1-202ENST00000517403 CROCCP3Q8IVE0 287 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 CMTM1Q8IZ96 169 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 SLC38A6Q8IZM9 456 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 KIR2DL5AQ8N109 375 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 KIR2DL5BQ8NHK3 375 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 DCANP1Q8TF63 244 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 GLYATL2Q8WU03 294 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 PHLDA1Q8WV24 401 aaPredicted RBP6.27□□□□□ -1.41
PABPC1-202ENST00000517403 GALNT14Q96FL9 552 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 AIFM2Q9BRQ8 373 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 MS4A6AQ9H2W1 248 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 THYN1Q9P016 225 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
PABPC1-202ENST00000517403 C3orf85A0A1B0GTC6 90 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 GNG7O60262 68 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 YIF1AO95070 293 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 PGAM2P15259 253 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 APOC4P55056 127 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 TSPAN5P62079 268 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 ANKRD55Q3KP44 614 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 RNASE10Q5GAN6 216 aaKnown RBP6.26□□□□□ -1.41
PABPC1-202ENST00000517403 OR4C16Q8NGL9 310 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 GPR146Q96CH1 333 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 TMEM56Q96MV1 263 aa6.26□□□□□ -1.41
PABPC1-202ENST00000517403 CLEC5AQ9NY25 188 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms