RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 CD81P60033 236 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 SRPXP78539 464 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 RELQ04864 619 aaPredicted RBP12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 ANKRD55Q3KP44 614 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 BTNL8Q6UX41 500 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 OR10C1Q96KK4 312 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 TUBA4BQ9H853 241 aa12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 DAZ1Q9NQZ3 744 aaKnown RBP12.1□□□□□ -0.47
PDLIM5-212ENST00000509333 A0A1B0GU03 582 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 CEBPZOSA8MTT3 80 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 PITX3O75364 302 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 SFT2D2O95562 160 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 SMCO1Q147U7 214 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 HAGHQ16775 308 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 TOMM20LQ6UXN7 152 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 DEFB125Q8N687 156 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 OR4X1Q8NH49 305 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 WWC2-AS2Q96NR7 200 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 TM2D3Q9BRN9 247 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 HSPB7Q9UBY9 170 aa12.09□□□□□ -0.47
PDLIM5-212ENST00000509333 LINC00854A0A1B0GVQ3 168 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 OR11H12B2RN74 326 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 CLN5O75503 358 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 YIF1AO95070 293 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 NDUFB6O95139 128 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 TNFRSF9Q07011 255 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 PPP1R1AQ13522 171 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 TRIQKQ629K1 86 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 RBPMS2Q6ZRY4 209 aaKnown RBP12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 HIPK2Q9H2X6 1198 aa12.08□□□□□ -0.48
PDLIM5-212ENST00000509333 TRAV14DV4A0A0A6YYC5 116 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 PIGBOS1A0A0B4J2F0 54 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 IGHV7-4-1A0A0J9YVY3 117 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 DUXBA0A1W2PPF3 345 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 RBMY1BA6NDE4 496 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 RBMY1EA6NEQ0 496 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 A6NHS1 94 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 CHEK1O14757 476 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 TSPAN4O14817 238 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 PLA2G10O15496 165 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 NXPH3O95157 252 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 RBMY1DP0C7P1 496 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 IL7P13232 177 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 VAMP1P23763 118 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 INPP1P49441 399 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 RBMS2Q15434 407 aaKnown RBP12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 LAMTOR1Q6IAA8 161 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 CENPSQ8N2Z9 138 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 RBKSQ9H477 322 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 FLVCR2Q9UPI3 526 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 U3KQ87 197 aa12.07□□□□□ -0.48
PDLIM5-212ENST00000509333 SLC25A6P12236 298 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 BTCP35070 178 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 OPRK1P41145 380 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 PRSS54Q6PEW0 395 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 ZNF600Q6ZNG1 722 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 TMEM116Q8NCL8 245 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 SLC24A4Q8NFF2 622 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 OR52B4Q8NGK2 314 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 RNASEH2CQ8TDP1 164 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 RCHY1Q96PM5 261 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 C7orf50Q9BRJ6 194 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 RHPN1-AS1Q9BWJ2 59 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 ZMAT4Q9H898 229 aa12.06□□□□□ -0.48
PDLIM5-212ENST00000509333 C9orf170A2RU37 121 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 IGKV1-17P01599 117 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 ATP5IP56385 69 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 FAM90A2PQ658T7 463 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 SLC16A13Q7RTY0 426 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 NOXA1Q86UR1 476 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 LILRB2Q8N423 598 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 OR1S1Q8NH92 325 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 RNF2Q99496 336 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 SPAG8Q99932 426 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 WFDC10AQ9H1F0 79 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 ZFAND3Q9H8U3 227 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 TMED3Q9Y3Q3 217 aa12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 PUS1Q9Y606 427 aaKnown RBP eCLIP12.05□□□□□ -0.48
PDLIM5-212ENST00000509333 TRAV30A0A087WSZ9 112 aa12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 IGHV3-49A0A0A0MS15 119 aa12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 CENPXA8MT69 81 aa12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 APOHP02749 345 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 LINC00299Q6ZSB3 139 aa12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 DTD1Q8TEA8 209 aa12.04□□□□□ -0.48
PDLIM5-212ENST00000509333 IGHV3OR16-13A0A075B7E8 117 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 IGHV3-74A0A0B4J1X5 117 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 RPS10-NUDT3A0A1W2PQS6 291 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 IFNA10P01566 189 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 HOXB5P09067 269 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 SLC25A4P12235 298 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 NPY1RP25929 384 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 TIGITQ495A1 244 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 VSIRQ9H7M9 311 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 SRD5A3Q9H8P0 318 aa12.03□□□□□ -0.48
PDLIM5-212ENST00000509333 FAM90A26D6RGX4 464 aa12.02□□□□□ -0.49
PDLIM5-212ENST00000509333 OR4E1P0C645 316 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms