RNA–Protein interactions for RNA: ENST00000505207.5

UBE2D3-219, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5 BASIC

Gene UBE2D3, Length 527 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-219ENST00000505207 IGKV1-39P01597 117 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 IGKV1D-39P04432 117 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 RPL5P46777 297 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 HOXA1P49639 335 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 AP2S1P53680 142 aaPredicted RBP8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 LSM3P62310 102 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 SNX29P2Q8IUI4 249 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 CCDC71LQ8N9Z2 235 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 STXBP6Q8NFX7 210 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 RNASE11Q8TAA1 199 aaKnown RBP8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 ZFAND1Q8TCF1 268 aa8.11□□□□□ -1.11
UBE2D3-219ENST00000505207 HELTA6NFD8 242 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 K7EQG2 157 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 APOHP02749 345 aaPredicted RBP8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 TBPP20226 339 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 CRYBB3P26998 211 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 OPRK1P41145 380 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 P2RY1P47900 373 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 PIGPP57054 158 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 NUTF2P61970 127 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 TRIM16LQ309B1 348 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 SPINK9Q5DT21 86 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 RNASE10Q5GAN6 216 aaKnown RBP8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 MZT2AQ6P582 158 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 LILRB2Q8N423 598 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 ARRDC1Q8N5I2 433 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 OR4X1Q8NH49 305 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 C15orf40Q8WUR7 153 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 YIPF6Q96EC8 236 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 COPZ2Q9P299 210 aa8.1□□□□□ -1.11
UBE2D3-219ENST00000505207 A0A0B4J293 547 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 IGHV4-28A0A0C4DH34 117 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 C3orf85A0A1B0GTC6 90 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 A0A1B0GU03 582 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 HLA-DMBP28068 263 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 TGFBR1P36897 503 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 ETV6P41212 452 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 PVRIGQ6DKI7 326 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 LINC00336Q6ZUF6 198 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 TRPT1Q86TN4 253 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 FAM219AQ8IW50 185 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 Q8NAQ8 132 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 Q8WTZ3 238 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 C1QTNF4Q9BXJ3 329 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 CACFD1Q9UGQ2 172 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 TBC1D24Q9ULP9 559 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 APLNQ9ULZ1 77 aa8.09□□□□□ -1.11
UBE2D3-219ENST00000505207 ZNF705EA8MWA4 302 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM25AB3EWG3 89 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM25CB3EWG5 89 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM25GB3EWG6 89 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 M0QYG6 137 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 IGKV1-5P01602 117 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 ZNF688P0C7X2 276 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 RNASE2P10153 161 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 SLC25A4P12235 298 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 NPY1RP25929 384 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 HTR2BP41595 481 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 RORCP51449 518 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 SPCS3P61009 180 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 SNRPD3P62318 126 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 IZUMO4Q1ZYL8 232 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 ACTL10Q5JWF8 245 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 ETFRF1Q6IPR1 90 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 NOXA1Q86UR1 476 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 AP3S1Q92572 193 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 RNF126Q9BV68 326 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 PFDN2Q9UHV9 154 aa8.08□□□□□ -1.12
UBE2D3-219ENST00000505207 GSTZ1O43708 216 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 HPGDSO60760 199 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 TNFAIP8O95379 198 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 HNRNPCP07910 306 aaKnown RBP eCLIP8.07□□□□□ -1.124e-11■■□□□ 14.1
UBE2D3-219ENST00000505207 P0C879 139 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 RBMY1A1P0DJD3 496 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 RBMY1CP0DJD4 496 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 ELK1P19419 428 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 PI3P19957 117 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 DHRS2Q13268 280 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 RBMY1FQ15415 496 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 LCE2AQ5TA79 106 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 LHFPL1Q86WI0 220 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM24BQ8N5W8 94 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 OR1S2Q8NGQ3 325 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 OR52E5Q8NH55 327 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 TERB2Q8NHR7 220 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 RNASEH2CQ8TDP1 164 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 TP53RKQ96S44 253 aa8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 SEPSECSQ9HD40 501 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 HEYLQ9NQ87 328 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-219ENST00000505207 IGHV4-4A0A075B6R2 117 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 KNCNA6PVL3 124 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 P0DMU3 169 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 UCP1P25874 307 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 PPP5CP53041 499 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 YPEL3P61236 119 aaPredicted RBP8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 DCANP1Q8TF63 244 aa8.06□□□□□ -1.12
UBE2D3-219ENST00000505207 RAB40CQ96S21 281 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms