RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 FAM223BA6NKX1 122 aa15.06■□□□□ 0
USP39-218ENST00000493829 CD28P10747 220 aa15.06■□□□□ 0
USP39-218ENST00000493829 ATP5G2Q06055 141 aa15.06■□□□□ 0
USP39-218ENST00000493829 TCTEX1D4Q5JR98 221 aa15.06■□□□□ 0
USP39-218ENST00000493829 ACSM6Q6P461 480 aa15.06■□□□□ 0
USP39-218ENST00000493829 FAM223AQ8IWN6 122 aa15.06■□□□□ 0
USP39-218ENST00000493829 RPS10-NUDT3A0A1W2PQS6 291 aa15.06■□□□□ 0
USP39-218ENST00000493829 ELANEP08246 267 aa15.06■□□□□ 0
USP39-218ENST00000493829 RND2P52198 227 aa15.06■□□□□ 0
USP39-218ENST00000493829 AKR1C1Q04828 323 aa15.06■□□□□ 0
USP39-218ENST00000493829 C9orf62Q8N4C0 152 aa15.06■□□□□ 0
USP39-218ENST00000493829 WIPF2Q8TF74 440 aaPredicted RBP15.06■□□□□ 0
USP39-218ENST00000493829 SLC35E1Q96K37 410 aa15.06■□□□□ 0
USP39-218ENST00000493829 S100A11P31949 105 aa15.05■□□□□ -0
USP39-218ENST00000493829 C19orf24Q9BVV8 132 aa15.05■□□□□ -0
USP39-218ENST00000493829 WFDC1Q9HC57 220 aa15.05■□□□□ -0
USP39-218ENST00000493829 TMEM89A2RUT3 159 aa15.04■□□□□ -0
USP39-218ENST00000493829 DLK1P80370 383 aa15.04■□□□□ -0
USP39-218ENST00000493829 FOXL1Q12952 345 aa15.04■□□□□ -0
USP39-218ENST00000493829 OR2F1Q13607 317 aa15.04■□□□□ -0
USP39-218ENST00000493829 GAMTQ14353 236 aa15.04■□□□□ -0
USP39-218ENST00000493829 ZNF345Q14585 488 aa15.04■□□□□ -0
USP39-218ENST00000493829 LGALSLQ3ZCW2 172 aaPredicted RBP15.04■□□□□ -0
USP39-218ENST00000493829 Q56UQ5 140 aa15.04■□□□□ -0
USP39-218ENST00000493829 KCNRGQ8N5I3 272 aa15.04■□□□□ -0
USP39-218ENST00000493829 COMMD1Q8N668 190 aa15.04■□□□□ -0
USP39-218ENST00000493829 EEF1AKMT3Q96AZ1 226 aa15.04■□□□□ -0
USP39-218ENST00000493829 ARL6Q9H0F7 186 aa15.04■□□□□ -0
USP39-218ENST00000493829 C21orf62Q9NYP8 219 aa15.04■□□□□ -0
USP39-218ENST00000493829 A0A1W2PRX2 142 aa15.03■□□□□ -0
USP39-218ENST00000493829 KRTAP10-3P60369 221 aa15.03■□□□□ -0
USP39-218ENST00000493829 KLK9Q2XQG4 91 aa15.03■□□□□ -0
USP39-218ENST00000493829 AWAT1Q58HT5 328 aa15.03■□□□□ -0
USP39-218ENST00000493829 ETFRF1Q6IPR1 90 aa15.03■□□□□ -0
USP39-218ENST00000493829 C18orf65Q6ZTR6 163 aa15.03■□□□□ -0
USP39-218ENST00000493829 TMUB2Q71RG4 321 aa15.03■□□□□ -0
USP39-218ENST00000493829 NPIPB3Q92617 1050 aa15.03■□□□□ -0
USP39-218ENST00000493829 CCDC140Q96MF4 163 aa15.03■□□□□ -0
USP39-218ENST00000493829 ATP5SQ99766 215 aa15.03■□□□□ -0
USP39-218ENST00000493829 TMEM147Q9BVK8 224 aa15.03■□□□□ -0
USP39-218ENST00000493829 GNB4Q9HAV0 340 aa15.03■□□□□ -0
USP39-218ENST00000493829 UQCC1Q9NVA1 299 aa15.03■□□□□ -0
USP39-218ENST00000493829 KLK9Q9UKQ9 250 aa15.03■□□□□ -0
USP39-218ENST00000493829 ANKRD34BA5PLL1 514 aa15.03■□□□□ -0
USP39-218ENST00000493829 OR2T8A6NH00 312 aa15.03■□□□□ -0
USP39-218ENST00000493829 SCAF4O95104 1147 aaKnown RBP15.03■□□□□ -0
USP39-218ENST00000493829 BRI3O95415 125 aa15.03■□□□□ -0
USP39-218ENST00000493829 GPR183P32249 361 aa15.03■□□□□ -0
USP39-218ENST00000493829 GPX4P36969 197 aaPredicted RBP15.03■□□□□ -0
USP39-218ENST00000493829 KIAA0141Q14154 515 aaPredicted RBP15.03■□□□□ -0
USP39-218ENST00000493829 LAMTOR1Q6IAA8 161 aa15.03■□□□□ -0
USP39-218ENST00000493829 CLEC19AQ6UXS0 136 aa15.03■□□□□ -0
USP39-218ENST00000493829 ZNF502Q8TBZ5 544 aa15.03■□□□□ -0
USP39-218ENST00000493829 CXorf58Q96LI9 332 aa15.03■□□□□ -0
USP39-218ENST00000493829 A0A0G2JLM5 398 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 TCRBV4S1A1TA0A5B7 111 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 ZNF491Q8N8L2 437 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 RNF152Q8N8N0 203 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 VN1R17PQ8TDU5 208 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 WFDC12Q8WWY7 111 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 CACNG8Q8WXS5 425 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 USMG5Q96IX5 58 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 CITED2Q99967 270 aaPredicted RBP15.02□□□□□ -0.01
USP39-218ENST00000493829 BOLA1Q9Y3E2 137 aa15.02□□□□□ -0.01
USP39-218ENST00000493829 A0A0D9SG52 128 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 A0A1B0GUS0 222 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 KANTRA0A1W2PQU2 76 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 TRBV12-3P01733 135 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 MFAP4P55083 255 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 MYOZ3Q8TDC0 251 aa15.01□□□□□ -0.01
USP39-218ENST00000493829 PPP5D1E7EU14 171 aa15□□□□□ -0.01
USP39-218ENST00000493829 F8W735 103 aaPredicted RBP15□□□□□ -0.01
USP39-218ENST00000493829 BCL2L11O43521 198 aa15□□□□□ -0.01
USP39-218ENST00000493829 RPL7L1Q6DKI1 246 aaKnown RBP15□□□□□ -0.01
USP39-218ENST00000493829 ARPC5LQ9BPX5 153 aa15□□□□□ -0.01
USP39-218ENST00000493829 GGACTQ9BVM4 153 aa15□□□□□ -0.01
USP39-218ENST00000493829 ATRQ13535 2644 aa15□□□□□ -0.01
USP39-218ENST00000493829 NUDT19A8MXV4 375 aa15□□□□□ -0.01
USP39-218ENST00000493829 GNG7O60262 68 aa15□□□□□ -0.01
USP39-218ENST00000493829 DFFBO76075 338 aa15□□□□□ -0.01
USP39-218ENST00000493829 FGF7P21781 194 aa15□□□□□ -0.01
USP39-218ENST00000493829 ATP6V1FQ16864 119 aa15□□□□□ -0.01
USP39-218ENST00000493829 VWC2Q2TAL6 325 aa15□□□□□ -0.01
USP39-218ENST00000493829 TREML4Q6UXN2 200 aa15□□□□□ -0.01
USP39-218ENST00000493829 KLHL30-AS1Q8NEE0 82 aa15□□□□□ -0.01
USP39-218ENST00000493829 OR4X1Q8NH49 305 aa15□□□□□ -0.01
USP39-218ENST00000493829 FBN1P35555 2871 aaKnown RBP15□□□□□ -0.01
USP39-218ENST00000493829 IGKV1OR2-108A0A075B7D4 117 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 TRBV7-1A0A0A6YYK4 115 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 ZFP92A6NM28 416 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 CLEC3BP05452 202 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 OR10J1P30954 320 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 NPBWR1P48145 328 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 DEFB136Q30KP8 78 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 TMEM116Q8NCL8 245 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 UBE2E2Q96LR5 201 aa14.99□□□□□ -0.01
USP39-218ENST00000493829 IGHV3-35A0A0C4DH35 117 aa14.98□□□□□ -0.01
USP39-218ENST00000493829 CLN5O75503 358 aa14.98□□□□□ -0.01
USP39-218ENST00000493829 TIGITQ495A1 244 aa14.98□□□□□ -0.01
USP39-218ENST00000493829 BTNL8Q6UX41 500 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms