RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 SLC25A38Q96DW6 304 aa14.36□□□□□ -0.11
PDLIM1-202ENST00000477757 NARS2Q96I59 477 aaKnown RBP14.36□□□□□ -0.11
PDLIM1-202ENST00000477757 SMIM9A6NGZ8 99 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 H3BMM0 161 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 EIF2B2P49770 351 aaKnown RBP14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 PPP5CP53041 499 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 CMTM1Q8IZ96 169 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 OR4A16Q8NH70 328 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 NIPSNAP3BQ9BS92 247 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 EHFQ9NZC4 300 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 RFNGQ9Y644 331 aa14.35□□□□□ -0.11
PDLIM1-202ENST00000477757 HTN3P15516 51 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 CBX5P45973 191 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 ERHP84090 104 aaKnown RBP14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 OXA1LQ15070 435 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 FAM222AQ5U5X8 452 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 SFXN4Q6P4A7 337 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 TMEM88Q6PEY1 159 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 DHRS11Q6UWP2 260 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 C6orf223Q8N319 242 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 SEC22AQ96IW7 307 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 AUNIPQ9H7T9 357 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 FAM212BQ9NTI7 297 aaPredicted RBP14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 TMED3Q9Y3Q3 217 aa14.34□□□□□ -0.11
PDLIM1-202ENST00000477757 A0A0A6YYH2 397 aa14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 NBDYA0A0U1RRE5 68 aa14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 A6NJ64 397 aa14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 HSPE1P61604 102 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 ZNF2Q9BSG1 426 aaPredicted RBP14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 YTHDF1Q9BYJ9 559 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 FXYD6Q9H0Q3 95 aa14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 RRP15Q9Y3B9 282 aaKnown RBP14.33□□□□□ -0.12
PDLIM1-202ENST00000477757 FAM90A26D6RGX4 464 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 GPR31O00270 319 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 HLA-DRB4P13762 266 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 SCAND1P57086 179 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 SNRPD3P62318 126 aaKnown RBP14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 H2BFWTQ7Z2G1 175 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 GLMPQ8WWB7 406 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 MRPL36Q9P0J6 103 aaKnown RBP14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 U3KQE9 123 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 HLA-DRB4X5D2U9 266 aa14.32□□□□□ -0.12
PDLIM1-202ENST00000477757 CORTO00230 105 aa14.31□□□□□ -0.12
PDLIM1-202ENST00000477757 CLN5O75503 358 aa14.31□□□□□ -0.12
PDLIM1-202ENST00000477757 C15orf53Q8NAA6 179 aa14.31□□□□□ -0.12
PDLIM1-202ENST00000477757 SEPSECSQ9HD40 501 aaKnown RBP14.31□□□□□ -0.12
PDLIM1-202ENST00000477757 SCGB2A1O75556 95 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 IGKV1-39P01597 117 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 IGKV1-17P01599 117 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 IGKV1D-39P04432 117 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 SNCAP37840 140 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 AP2S1P53680 142 aaPredicted RBP14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 SPINK9Q5DT21 86 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 C16orf54Q6UWD8 224 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 SPATA12Q7Z6I5 190 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 OR5H6Q8NGV6 325 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 TMEM230Q96A57 120 aa14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 TXNL4BQ9NX01 149 aaKnown RBP14.3□□□□□ -0.12
PDLIM1-202ENST00000477757 IGHV3OR16-12A0A075B7B8 117 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 MEIS3P1A6NDR6 274 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 INS-IGF2F8WCM5 200 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 RFX2P48378 723 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 OR4X1Q8NH49 305 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 ZNRF2Q8NHG8 242 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 ATG101Q9BSB4 218 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 FNDC4Q9H6D8 234 aaPredicted RBP14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 NRN1Q9NPD7 142 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 IFT46Q9NQC8 304 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 MYCBP2O75592 4640 aa14.29□□□□□ -0.12
PDLIM1-202ENST00000477757 AQP4P55087 323 aa14.28□□□□□ -0.12
PDLIM1-202ENST00000477757 PHLDA2Q53GA4 152 aa14.28□□□□□ -0.12
PDLIM1-202ENST00000477757 MRGPRFQ96AM1 343 aa14.28□□□□□ -0.12
PDLIM1-202ENST00000477757 ANAPC10Q9UM13 185 aa14.28□□□□□ -0.12
PDLIM1-202ENST00000477757 RNASE2P10153 161 aaKnown RBP14.27□□□□□ -0.13
PDLIM1-202ENST00000477757 SLC35G3Q8N808 338 aa14.27□□□□□ -0.13
PDLIM1-202ENST00000477757 DIABLOQ9NR28 239 aa14.27□□□□□ -0.13
PDLIM1-202ENST00000477757 HNRNPCP07910 306 aaKnown RBP eCLIP14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 OPRK1P41145 380 aa14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 NKX2-1P43699 371 aaPredicted RBP14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 TAS2R46P59540 309 aa14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 TIGITQ495A1 244 aa14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 TBC1D26Q86UD7 250 aa14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 YTHDF2Q9Y5A9 579 aaKnown RBP14.26□□□□□ -0.13
PDLIM1-202ENST00000477757 PMP2P02689 132 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 S100GP29377 79 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 RPL5P46777 297 aaKnown RBP14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 HOXA1P49639 335 aaPredicted RBP14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 SUB1P53999 127 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■□□□□ 10.4
PDLIM1-202ENST00000477757 IZUMO4Q1ZYL8 232 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 GDF5OSQ5U4N7 250 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 ZNF709Q8N972 641 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 OR5H2Q8NGV7 314 aa14.25□□□□□ -0.13
PDLIM1-202ENST00000477757 TRAV30A0A087WSZ9 112 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 LOC102723971A0A1B0GUV8 181 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 EPM2AB3EWF7 344 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 ALDH3B2P48448 385 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 FXYD7P58549 80 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 DAD1P61803 113 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 OR6F1Q8NGZ6 308 aa14.24□□□□□ -0.13
PDLIM1-202ENST00000477757 CLUHP3Q96NS8 147 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms