RNA–Protein interactions for RNA: ENST00000476391.5

HDAC1-206, Transcript of histone deacetylase 1, humanhuman

TSL 1 (best)

Gene HDAC1, Length 2,409 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-206ENST00000476391 MGST3O14880 152 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 SS18L1O75177 396 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-206ENST00000476391 C8orf88P0DMB2 117 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 KIR2DL2P43627 348 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-206ENST00000476391 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 AP5S1Q9NUS5 200 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 TET2Q6N021 2002 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-206ENST00000476391 NGFP01138 241 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 IGHV4-34P06331 123 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 CELA3AP09093 270 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 DSCR4P56555 118 aaPredicted RBP11.29□□□□□ -0.6
HDAC1-206ENST00000476391 WFDC2Q14508 124 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 LGALS9BQ3B8N2 356 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 LGALS9CQ6DKI2 356 aa11.29□□□□□ -0.6
HDAC1-206ENST00000476391 CABIN1Q9Y6J0 2220 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 OOEPA6NGQ2 149 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 FBLL1A6NHQ2 334 aaKnown RBP11.28□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF716A6NP11 495 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 C10orf142B7Z368 130 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 C12orf77C9JDV5 145 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 NCR2O95944 276 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 CD24P25063 80 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 TTC9CQ8N5M4 171 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 PLPPR2Q96GM1 343 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 GFRA4Q9GZZ7 299 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 A0A1W2PRD5 423 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 A0A1W2PRF3 423 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 A0A1W2PRM7 423 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 TMEM30CPA0ZSE6 113 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 PRR33A8MZF0 331 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 C3orf80F5H4A9 247 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 PEX7O00628 323 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 CHEK1O14757 476 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 SP1P08047 785 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF138P52744 262 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF296Q8WUU4 475 aaPredicted RBP11.28□□□□□ -0.6
HDAC1-206ENST00000476391 SLC25A33Q9BSK2 321 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 MRPL32Q9BYC8 188 aaKnown RBP11.28□□□□□ -0.6
HDAC1-206ENST00000476391 RPP21Q9H633 154 aaKnown RBP11.28□□□□□ -0.6
HDAC1-206ENST00000476391 TCF19Q9Y242 345 aa11.28□□□□□ -0.6
HDAC1-206ENST00000476391 C5orf49A4QMS7 147 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 CYC1P08574 325 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 GABRG2P18507 467 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 ZNF146Q15072 292 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 ACP7Q6ZNF0 438 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 PPP1R32Q7Z5V6 425 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 PTPRBP23467 1997 aa11.27□□□□□ -0.6
HDAC1-206ENST00000476391 ASCC3Q8N3C0 2202 aaKnown RBP11.27□□□□□ -0.61
HDAC1-206ENST00000476391 ERVK-16P61578 105 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 PLGLB1Q02325 96 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 GPR82Q96P67 336 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 PRSS22Q9GZN4 317 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 CYSLTR1Q9Y271 337 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 VCANP13611 3396 aa11.27□□□□□ -0.61
HDAC1-206ENST00000476391 LIFP15018 202 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 LTBRP36941 435 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 CYB561P49447 251 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 LINC00205P59089 165 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 ERVK11-1P61568 191 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 RBPMS2Q6ZRY4 209 aaKnown RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 C17orf82Q86X59 251 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 ZNF502Q8TBZ5 544 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 IL23AQ9NPF7 189 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 RANBP2P49792 3224 aaKnown RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 CER1O95813 267 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 CRYGCP07315 174 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 CEBPDP49716 269 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 ETDBQ3ZM63 59 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 LINC00696Q6ZRV3 163 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 C8orf86Q6ZUL3 223 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 TMEM116Q8NCL8 245 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 PHLDA1Q8WV24 401 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 HIGD1BQ9P298 99 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 ERG28Q9UKR5 140 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 TIMM8BQ9Y5J9 83 aaPredicted RBP11.26□□□□□ -0.61
HDAC1-206ENST00000476391 F5P12259 2224 aa11.26□□□□□ -0.61
HDAC1-206ENST00000476391 E9PLD3 99 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 LAMTOR5O43504 91 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 FCGR3BO75015 233 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 OR1C1Q15619 314 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 PRR31Q5SQ13 230 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 PIP4P2Q8N4L2 257 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 PSG8Q9UQ74 426 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 POLDIP2Q9Y2S7 368 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 APOHP02749 345 aaPredicted RBP11.25□□□□□ -0.61
HDAC1-206ENST00000476391 ATP5G2Q06055 141 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 FOXF2Q12947 444 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 FAM53AQ6NSI3 398 aaPredicted RBP11.25□□□□□ -0.61
HDAC1-206ENST00000476391 LCNL1Q6ZST4 164 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 ZNF329Q86UD4 541 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 PGLYRP4Q96LB8 373 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 DEFB126Q9BYW3 111 aa11.25□□□□□ -0.61
HDAC1-206ENST00000476391 CT45A10P0DMU9 189 aa11.24□□□□□ -0.61
HDAC1-206ENST00000476391 CR1LQ2VPA4 569 aa11.24□□□□□ -0.61
HDAC1-206ENST00000476391 PSMG4Q5JS54 123 aa11.24□□□□□ -0.61
HDAC1-206ENST00000476391 SH2D6Q7Z4S9 175 aa11.24□□□□□ -0.61
HDAC1-206ENST00000476391 RPRMLQ8N4K4 120 aa11.24□□□□□ -0.61
HDAC1-206ENST00000476391 FAM167A-AS1Q96KT0 104 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms