RNA–Protein interactions for RNA: ENST00000474766.1

SH3D21-202, Transcript of SH3 domain containing 21, humanhuman

TSL 1 (best)

Gene SH3D21, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-202ENST00000474766 NIT1Q86X76 327 aa17.32■□□□□ 0.36
SH3D21-202ENST00000474766 PSMG3-AS1Q96PY0 264 aa17.32■□□□□ 0.36
SH3D21-202ENST00000474766 MS4A5Q9H3V2 200 aa17.32■□□□□ 0.36
SH3D21-202ENST00000474766 MRPL27Q9P0M9 148 aaKnown RBP17.32■□□□□ 0.36
SH3D21-202ENST00000474766 A1L4Q6 167 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 NDUFS8O00217 210 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 TSPOP30536 169 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 GLRXP35754 106 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 JPT1Q9UK76 154 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 ADGRG4Q8IZF6 3080 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 IGHV2-26A0A0B4J1V2 119 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 AMY1AP04745 511 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 DUTP33316 252 aaKnown RBP17.31■□□□□ 0.36
SH3D21-202ENST00000474766 PPP1R35Q8TAP8 253 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 CADP27708 2225 aa17.31■□□□□ 0.36
SH3D21-202ENST00000474766 LHBP01229 141 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 VDAC2P45880 294 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-202ENST00000474766 SPRNQ5BIV9 151 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 OR2V2Q96R30 315 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 NPVFQ9HCQ7 196 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 SLC25A10Q9UBX3 287 aaPredicted RBP17.3■□□□□ 0.36
SH3D21-202ENST00000474766 M0R1B8 84 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 FRMD6-AS1P0C7T7 363 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 PMCHP20382 165 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 GNG4P50150 75 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 EFNB3Q15768 340 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 BORCS7Q96B45 105 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 PPIAL4AQ9Y536 164 aa17.3■□□□□ 0.36
SH3D21-202ENST00000474766 IGLV3-9A0A075B6K5 115 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 F2RL2O00254 374 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 ISLRO14498 428 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 OR9G9P0C7N8 305 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 GPR12P47775 334 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 LOXL3P58215 753 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 STUMQ69YW2 141 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 RCHY1Q96PM5 261 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 HECTD1Q9ULT8 2610 aa17.29■□□□□ 0.36
SH3D21-202ENST00000474766 BMPR1BO00238 502 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 CA2P00918 260 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 OR4P4Q8NGL7 312 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 GNG12Q9UBI6 72 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 IGHV1-69-2A0A0G2JMI3 117 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 HELTA6NFD8 242 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 FAM90A27PA6NNH2 459 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 SELENOVP59797 346 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 CENPWQ5EE01 88 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 RASL11AQ6T310 242 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 MOGAT3Q86VF5 341 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 TSKUQ8WUA8 353 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 GSX1Q9H4S2 264 aaPredicted RBP17.28■□□□□ 0.36
SH3D21-202ENST00000474766 TMEM167BQ9NRX6 74 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 IL19Q9UHD0 177 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 HCFC1P51610 2035 aa17.28■□□□□ 0.36
SH3D21-202ENST00000474766 IGHV3OR15-7A0A075B7D8 119 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 IGHV2-70DA0A0C4DH43 119 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 A0A1W2PN81 502 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 SRIP30626 198 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 GATA4P43694 442 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 RAB31Q13636 194 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 LTC4SQ16873 150 aa17.27■□□□□ 0.36
SH3D21-202ENST00000474766 HEYLQ9NQ87 328 aaPredicted RBP17.27■□□□□ 0.36
SH3D21-202ENST00000474766 SMIM27A0A1W2PRY6 76 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 CGB3P0DN86 165 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 CGB7P0DN87 165 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 RPS20P60866 119 aaKnown RBP17.26■□□□□ 0.35
SH3D21-202ENST00000474766 TIGITQ495A1 244 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 ZNRF1Q8ND25 227 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 ZNF439Q8NDP4 499 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 OR4A16Q8NH70 328 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 ALKBH7Q9BT30 221 aaPredicted RBP17.26■□□□□ 0.35
SH3D21-202ENST00000474766 TRAV9-2A0A087WT02 112 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 ZNF134P52741 427 aa17.26■□□□□ 0.35
SH3D21-202ENST00000474766 WIPF2Q8TF74 440 aaPredicted RBP17.26■□□□□ 0.35
SH3D21-202ENST00000474766 SEPSECSQ9HD40 501 aaKnown RBP17.26■□□□□ 0.35
SH3D21-202ENST00000474766 ASH1LQ9NR48 2969 aaKnown RBP17.25■□□□□ 0.35
SH3D21-202ENST00000474766 FNDC10F2Z333 226 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 GRNP28799 593 aaKnown RBP17.25■□□□□ 0.35
SH3D21-202ENST00000474766 PRAMEF5Q5TYX0 476 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 TEPPQ6URK8 271 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 STPG3Q8N7X2 389 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 FAM222BQ8WU58 562 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 C1orf159Q96HA4 380 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 IFI27L2Q9H2X8 130 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 FCGR3BO75015 233 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 APCSP02743 223 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 ITLN1Q8WWA0 313 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 CORO2AQ92828 525 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 JKAMPQ9P055 326 aa17.25■□□□□ 0.35
SH3D21-202ENST00000474766 LOC105371242A0A075B767 164 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 IGLC7A0M8Q6 106 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 SPRY3O43610 288 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 LINC00869P0C866 280 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 TNFSF4P23510 183 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 KIAA1644Q3SXP7 199 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 FBLN7Q53RD9 439 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 LYG1Q8N1E2 194 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 Q8TCH9 128 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 WNT10AQ9GZT5 417 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 CALYQ9NYX4 217 aa17.24■□□□□ 0.35
SH3D21-202ENST00000474766 IZUMO1RA6ND01 250 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms