RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SRSF6Q13247 344 aaKnown RBP10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 RASL11AQ6T310 242 aa10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 NUDT10Q8NFP7 164 aa10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 ORAOV1Q8WV07 137 aa10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 SNRNP40Q96DI7 357 aaKnown RBP10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 NUDT11Q96G61 164 aa10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 MRPL32Q9BYC8 188 aaKnown RBP10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 ZNF71Q9NQZ8 489 aaPredicted RBP10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 AMMECR1Q9Y4X0 333 aaPredicted RBP10.55□□□□□ -0.72
PDZRN3-205ENST00000466780 SPENQ96T58 3664 aaKnown RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 NKX2-8O15522 239 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 SPRY3O43610 288 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 GPR6P46095 362 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 RPL8P62917 257 aaKnown RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 ALKBH2Q6NS38 261 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 UNQ5815/PRO19632Q6UWF5 114 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 FAM231DQ6ZW35 169 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 PLSCR4Q9NRQ2 329 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 MRPS16Q9Y3D3 137 aaKnown RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 ICE1Q9Y2F5 2266 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 TTC28Q96AY4 2481 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 VWC2LB2RUY7 222 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 HSBP1O75506 76 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 KLF5Q13887 457 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 PMCHL1Q16048 86 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 TBR1Q16650 682 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 ZNF329Q86UD4 541 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 KIR3DL3Q8N743 410 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 OR8B3Q8NGG8 313 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 GRAMD2BQ96HH9 432 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 OR8B2Q96RD0 313 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 ALKBH7Q9BT30 221 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 TNFRSF19Q9NS68 423 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 SLC25A15Q9Y619 301 aa10.54□□□□□ -0.72
PDZRN3-205ENST00000466780 IGHV2-26A0A0B4J1V2 119 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 C2orf70A6NJV1 201 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 PRR31Q5SQ13 230 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 BET1LQ9NYM9 111 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 ARFGEF3Q5TH69 2177 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 TRAV9-2A0A087WT02 112 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 A0A1W2PN81 502 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 C20orf202A1L168 122 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 E7EUB6 86 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 M0R2Z0 102 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 CORTO00230 105 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 IGLL1P15814 213 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 ATP5IP56385 69 aaPredicted RBP10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 Q56UQ5 140 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 PATE2Q6UY27 113 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 ZNF841Q6ZN19 808 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 BHLHA15Q7RTS1 189 aaPredicted RBP10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 OR5B3Q8NH48 314 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 FAM222BQ8WU58 562 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 RND1Q92730 232 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 ZNF714Q96N38 554 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 C7orf69Q9H7B7 122 aa10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 CNOT1A5YKK6 2376 aaKnown RBP10.53□□□□□ -0.72
PDZRN3-205ENST00000466780 PRR33A8MZF0 331 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 H0YJW9 148 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 PEX7O00628 323 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 OR2J3O76001 311 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 PCP4P48539 62 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 SLC25A48Q6ZT89 311 aaKnown RBP10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 OR4F17Q8NGA8 305 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 URB1-AS1Q96HZ7 61 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 RAB9BQ9NP90 201 aa10.52□□□□□ -0.72
PDZRN3-205ENST00000466780 RAI1Q7Z5J4 1906 aaPredicted RBP10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 PTTG1IPP53801 180 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 PRR27Q6MZM9 219 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 RNASEKQ6P5S7 137 aaKnown RBP10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 VHLLQ6RSH7 139 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 DEFB108BQ8NET1 73 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 FDCSPQ8NFU4 85 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 GAFA1Q96PS6 74 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 PAXXQ9BUH6 204 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 SAP30LQ9HAJ7 183 aa10.52□□□□□ -0.73
PDZRN3-205ENST00000466780 NAV3Q8IVL0 2385 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 DLL1O00548 723 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 FSTL3O95633 263 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 TOMM40O96008 361 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 CAMPP49913 170 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 UBE2G1P62253 170 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 FAM216BQ8N7L0 139 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 RNASE8Q8TDE3 154 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 CACNG8Q8WXS5 425 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 FNDC4Q9H6D8 234 aaPredicted RBP10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 LINC00574Q9H8X3 128 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 ASCL3Q9NQ33 180 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 NDUFA4L2Q9NRX3 87 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 RPUSD1Q9UJJ7 312 aaKnown RBP10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 CFAP47Q6ZTR5 3102 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 HIGD1CA8MV81 97 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 GNG5P63218 68 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 CCL13Q99616 98 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 DKK4Q9UBT3 224 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 COX11Q9Y6N1 276 aa10.51□□□□□ -0.73
PDZRN3-205ENST00000466780 A0A1B0GXF2 115 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms