RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 LRTM2Q8N967 370 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CCDC71LQ8N9Z2 235 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 BSCL2Q96G97 398 aaPredicted RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 HARBI1Q96MB7 349 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 C11orf1Q9H5F2 150 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF702PQ9H963 129 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 RAB9BQ9NP90 201 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 METTL1Q9UBP6 276 aaKnown RBP2.78□□□□□ -1.97
SCFD1-204ENST00000463622 CACNG5Q9UF02 275 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 LINC00527Q9UJ94 153 aa2.78□□□□□ -1.97
SCFD1-204ENST00000463622 TET2Q6N021 2002 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 IGHV7-81A0A0B4J1V7 117 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 SNRPGP15A8MWD9 76 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 TEX22C9J3V5 150 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 UPK2O00526 184 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RBFOX2O43251 390 aaKnown RBP eCLIP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 NDUFB4O95168 129 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 HPRT1P00492 218 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 MOSP00540 346 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 CA2P00918 260 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 APOA2P02652 100 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM11P17152 192 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 IL3RAP26951 378 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 BCAP31P51572 246 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 DYNLT3P51808 116 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 MFAP2P55001 183 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 PAX9P55771 341 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 TAS2R31P59538 309 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RRAS2P62070 204 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 CATR1Q13166 79 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 POU2AF1Q16633 256 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 TCTEX1D4Q5JR98 221 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 LPCAT3Q6P1A2 487 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 FOXRED2Q8IWF2 684 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 C5orf56Q8N8D9 126 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 OR11H4Q8NGC9 324 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 OR10W1Q8NGF6 305 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 OR4D5Q8NGN0 318 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 OR5M8Q8NGP6 311 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 OR4S2Q8NH73 311 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RBPMSQ93062 196 aaKnown RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 FLYWCH2Q96CP2 140 aaKnown RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 ST6GAL2Q96JF0 529 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RBM14Q96PK6 669 aaKnown RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 NEURL2Q9BR09 285 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 MAGT1Q9H0U3 335 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RANGRFQ9HD47 186 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RAB18Q9NP72 206 aa2.77□□□□□ -1.97
SCFD1-204ENST00000463622 RCL1Q9Y2P8 373 aaKnown RBP2.77□□□□□ -1.97
SCFD1-204ENST00000463622 A0A0B4J2A0 478 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 C13orf42A0A1B0GVH6 325 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MSGN1A6NI15 193 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 C15orf61A6NNL5 157 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 FAM25EA8MYX2 175 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OOSP1A8MZH6 123 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 G3V318 75 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ATP6V0E1O15342 81 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NBR2O15453 112 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ST8SIA3O43173 380 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 TXNL1O43396 289 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SSNA1O43805 119 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SOX15O60248 233 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 CREBL2O60519 120 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 PRAF2O60831 178 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SLC22A5O76082 557 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 KBTBD11O94819 623 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 DHFRP00374 187 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 AMBPP02760 352 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 PRH1P02810 166 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 REG1AP05451 166 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SERPINE2P07093 398 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 IAPPP10997 89 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 AREGP15514 252 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NQO2P16083 231 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 CEACAM3P40198 252 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 AKR1C2P52895 323 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 UBE2KP61086 200 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 POLR2GP62487 172 aaKnown RBP eCLIP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 GNB1P62873 340 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 CX3CL1P78423 397 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 PRSS8Q16651 343 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 RTL8BQ17RB0 113 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 C5orf64Q2M2E5 130 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 IAH1Q2TAA2 248 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 LRRC37A5PQ49AS3 106 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 HAPLN4Q86UW8 402 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ZNF695Q8IW36 515 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 LGI3Q8N145 548 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 MINDY2Q8NBR6 621 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 DMBX1Q8NFW5 382 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NPBQ8NG41 125 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR2T10Q8NGZ9 312 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 TMEM167AQ8TBQ9 72 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 ADTRPQ96IZ2 230 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 NOL4LQ96MY1 436 aaPredicted RBP2.76□□□□□ -1.97
SCFD1-204ENST00000463622 SCGB3A2Q96PL1 93 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 GPR61Q9BZJ8 451 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 OR5AC2Q9NZP5 309 aa2.76□□□□□ -1.97
SCFD1-204ENST00000463622 COMMD9Q9P000 198 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 124.6 ms