RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 LOXL2Q9Y4K0 774 aa4.18□□□□□ -1.74
PCDH9-203ENST00000456367 PHLDA3Q9Y5J5 127 aa4.18□□□□□ -1.74
PCDH9-203ENST00000456367 SCN8AQ9UQD0 1980 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SH2D7A6NKC9 451 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 FAM157AC9JC47 383 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 K7EQS6 105 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 PRRG2O14669 202 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 CD33P20138 364 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 ID1P41134 155 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 KLF5Q13887 457 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 ATXN8Q156A1 80 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 POU2AF1Q16633 256 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 TMEM42Q69YG0 159 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 RTN4RL2Q86UN3 420 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 TMEM101Q96IK0 257 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SLC25A39Q9BZJ4 359 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 ONECUT1Q9UBC0 465 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 PLAUP00749 431 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 CELA2BP08218 269 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 CRYGSP22914 178 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 FHL1Q13642 323 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 FOXA2Q9Y261 457 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SHANK3Q9BYB0 1731 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 FABP5P3A8MUU1 101 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SPEM2Q0P670 501 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 C1orf53Q5VUE5 145 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 VGLL1Q99990 258 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SMIM27A0A1W2PRY6 76 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 LYZL6O75951 148 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 IGHV3-13P01766 116 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 IGHV3-7P01780 117 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 FCGR2BP31994 310 aaPredicted RBP4.17□□□□□ -1.74
PCDH9-203ENST00000456367 TMEM240Q5SV17 173 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 TMEM170BQ5T4T1 132 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 STPG1Q5TH74 334 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 WDR82Q6UXN9 313 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 ZNF562Q6V9R5 426 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 ACP7Q6ZNF0 438 aa4.17□□□□□ -1.74
PCDH9-203ENST00000456367 SPTBP11277 2137 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 DOCK4Q8N1I0 1966 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 ZNF815PA8K554 130 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 IFITM1P13164 125 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 VEGFBP49765 207 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 PVRIGQ6DKI7 326 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 LYPD1Q8N2G4 141 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 DEPPQ9NTK1 212 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 PILRBQ9UKJ0 227 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 CSRP1P21291 193 aaKnown RBP4.16□□□□□ -1.74
PCDH9-203ENST00000456367 APOBEC3AP31941 199 aaPredicted RBP4.16□□□□□ -1.74
PCDH9-203ENST00000456367 S100A7L2Q5SY68 101 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 OR9G1Q8NH87 305 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 PSG8Q9UQ74 426 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 RFNGQ9Y644 331 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 R4GN57 208 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 V9GYV3 84 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 TRAV2A0A0B4J234 112 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 TRAV24A0A0B4J272 114 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 IGHV1OR15-9A0A0B4J2B8 117 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 H7C1H1 209 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 GHRHP01286 108 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 DUTP33316 252 aaKnown RBP4.16□□□□□ -1.74
PCDH9-203ENST00000456367 ASIPP42127 132 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 PAX9P55771 341 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 UNQ6494/PRO21346Q6UXR6 183 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 VKORC1L1Q8N0U8 176 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 METTL26Q96S19 204 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 NDUFA3O95167 84 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 LAGE3Q14657 143 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 PMVKQ15126 192 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 ZNF726P1Q15940 193 aa4.16□□□□□ -1.74
PCDH9-203ENST00000456367 ANK1P16157 1881 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 IGKV1-12A0A0C4DH73 117 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 C21orf140B9A014 251 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 G3V4G9 280 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 CDX4O14627 284 aaPredicted RBP4.15□□□□□ -1.74
PCDH9-203ENST00000456367 NKX2-8O15522 239 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 ZIC3O60481 467 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 FCN3O75636 299 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 IGKV1D-12P01611 117 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 IGHV4-34P06331 123 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 ALKBH6Q3KRA9 238 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 GCSAMLQ5JQS6 135 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 FOXL2NBQ6ZUU3 175 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 WFDC8Q8IUA0 241 aa4.15□□□□□ -1.74
PCDH9-203ENST00000456367 BEX4Q9NWD9 120 aaPredicted RBP4.15□□□□□ -1.74
PCDH9-203ENST00000456367 SHISA9B4DS77 424 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 TGFBR3LH3BV60 316 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 WNT2P09544 360 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 IGLC1P0CG04 106 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 HCP5Q6MZN7 132 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 TMEM92Q6UXU6 159 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 BMPERQ8N8U9 685 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 ZNF441Q8N8Z8 693 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 C8orf46Q8TAG6 207 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 C1orf147Q96MC9 270 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-203ENST00000456367 PHF7Q9BWX1 381 aaPredicted RBP4.15□□□□□ -1.75
PCDH9-203ENST00000456367 IGHV1-45A0A0A0MS14 117 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 A0A1W2PQF6 199 aa4.15□□□□□ -1.75
PCDH9-203ENST00000456367 C15orf62A8K5M9 175 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms