RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 MRPL19P49406 292 aaKnown RBP3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CRYBA2P53672 197 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CRISP1P54107 249 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 UFM1P61960 85 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 AESQ08117 197 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 OR5I1Q13606 314 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 PCLAFQ15004 111 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 FCN2Q15485 313 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CEACAM21Q3KPI0 293 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 COX19Q49B96 90 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 C5orf47Q569G3 176 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 OCIAD2Q56VL3 154 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 C10orf91Q5T1B1 145 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 UNQ5815/PRO19632Q6UWF5 114 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 COMMD2Q86X83 199 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CBR4Q8N4T8 237 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 NHLRC2Q8NBF2 726 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 PROKR2Q8NFJ6 384 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 OR11H4Q8NGC9 324 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 OR10D4PQ8NGN7 298 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 COQ8AQ8NI60 647 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 ORAOV1Q8WV07 137 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 ASB17Q8WXJ9 295 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 PIGCQ92535 297 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 HIST1H2BAQ96A08 127 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 LGALS12Q96DT0 336 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 HARBI1Q96MB7 349 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 RDH12Q96NR8 316 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 ERMAPQ96PL5 475 aaPredicted RBP3.34□□□□□ -1.87
SDCBP-205ENST00000447267 FAAP24Q9BTP7 215 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 SDF2L1Q9HCN8 221 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 SMCO4Q9NRQ5 59 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 SAMD4AQ9UPU9 718 aaKnown RBP3.34□□□□□ -1.87
SDCBP-205ENST00000447267 CARHSP1Q9Y2V2 147 aaKnown RBP3.34□□□□□ -1.87
SDCBP-205ENST00000447267 RAP2CQ9Y3L5 183 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 V9GYS6 101 aa3.34□□□□□ -1.87
SDCBP-205ENST00000447267 TMEM218A2RU14 115 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 EFCAB9A8MZ26 197 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 K7ERU9 68 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 FCN1O00602 326 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 HSPB6O14558 160 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 PHOX2AO14813 284 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 SNNO75324 88 aaPredicted RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 SIX6O95475 246 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 TSPAN13O95857 204 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 FADS2O95864 444 aaKnown RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 HLA-AP01891 365 aaKnown RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MT-ND4LP03901 98 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 CX3CR1P49238 355 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 KRTAP10-12P60413 245 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MS4A2Q01362 244 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MMDQ15546 238 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 CYP51A1Q16850 503 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 LTC4SQ16873 150 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 LIPKQ5VXJ0 399 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 CD200R1LQ6Q8B3 271 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 BTNL8Q6UX41 500 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF562Q6V9R5 426 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 LINC01551Q86U37 167 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF546Q86UE3 836 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 PPP1R27Q86WC6 154 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF664Q8N3J9 261 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 FTMTQ8N4E7 242 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 GBGT1Q8N5D6 347 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 RNF148Q8N7C7 305 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 TCTEX1D1Q8N7M0 179 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 BEST4Q8NFU0 473 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 OR8B12Q8NGG6 310 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 OR51L1Q8NGJ5 315 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 OR13C9Q8NGT0 318 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 OR2AJ1Q8NGZ0 328 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 OR4S2Q8NH73 311 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 RNF133Q8WVZ7 376 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 PINX1Q96BK5 328 aaKnown RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 RPUSD4Q96CM3 377 aaKnown RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MAGT1Q9H0U3 335 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MED28Q9H204 178 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 HRASLSQ9HDD0 168 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 SLC2A9Q9NRM0 540 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 IL36RNQ9UBH0 155 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 ZNF230Q9UIE0 474 aaPredicted RBP3.33□□□□□ -1.88
SDCBP-205ENST00000447267 RNF150Q9ULK6 438 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 B9D1Q9UPM9 204 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 MED31Q9Y3C7 131 aa3.33□□□□□ -1.88
SDCBP-205ENST00000447267 TRGV10A0A0A0MS01 117 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 TCRBV3S1A0A5B6 114 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR5H14A6NHG9 310 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR5B21A6NL26 309 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 M0QXV9 152 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 CDC42EP2O14613 210 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 GOSR2O14653 212 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 EI24O14681 340 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 DFFBO76075 338 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 YIF1AO95070 293 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 GAPDHP04406 335 aaKnown RBP3.32□□□□□ -1.88
SDCBP-205ENST00000447267 BPGMP07738 259 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 OR10J4P0C629 311 aa3.32□□□□□ -1.88
SDCBP-205ENST00000447267 CGB3P0DN86 165 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms