RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SLC35E1Q96K37 410 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 GSX1Q9H4S2 264 aaPredicted RBP13.37□□□□□ -0.27
CALD1-204ENST00000417172 PXMP4Q9Y6I8 212 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 S4R3C0 116 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 FNDC10F2Z333 226 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 C17orf112F2Z3M2 114 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 G3V318 75 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 HMGB3O15347 200 aaKnown RBP13.37□□□□□ -0.27
CALD1-204ENST00000417172 MPDU1O75352 247 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 YIF1AO95070 293 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 CCL20P78556 96 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 C9orf152Q5JTZ5 239 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 Q6ZS46 218 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 LYPD6BQ8NI32 183 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 CACNG8Q8WXS5 425 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 RCC1LQ96I51 464 aaKnown RBP13.37□□□□□ -0.27
CALD1-204ENST00000417172 LINC00527Q9UJ94 153 aa13.37□□□□□ -0.27
CALD1-204ENST00000417172 CUBNO60494 3623 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 CRYGCP07315 174 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 OR10J1P30954 320 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 SPSB3Q6PJ21 355 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 STPG3Q8N7X2 389 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 FANCD2OSQ96PS1 177 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 TMEM231Q9H6L2 316 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 SLC25A22Q9H936 323 aa13.36□□□□□ -0.27
CALD1-204ENST00000417172 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 NPIPB5A8MRT5 1133 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 I3L2K1 104 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 H2AFB1P0C5Y9 115 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 IER3P46695 156 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 FGF8P55075 233 aaPredicted RBP13.35□□□□□ -0.27
CALD1-204ENST00000417172 BLCAPP62952 87 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 FAM122CQ6P4D5 195 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 BPIFCQ8NFQ6 507 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 SGMS2Q8NHU3 365 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 SFT2D1Q8WV19 159 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 MARC2Q969Z3 335 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 TMUB1Q9BVT8 246 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 K7EIM0 57 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 TSPAN15O95858 294 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 BPIFB3P59826 476 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 B2MP61769 119 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 ZNF90Q03938 601 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 UNQ5815/PRO19632Q6UWF5 114 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 LCN15Q6UWW0 184 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 SPNS3Q6ZMD2 512 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 TTC9CQ8N5M4 171 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 OR10G4Q8NGN3 311 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 OR10G9Q8NGN4 311 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 OR10G7Q8NGN6 311 aa13.35□□□□□ -0.27
CALD1-204ENST00000417172 C9orf139Q6ZV77 190 aa13.34□□□□□ -0.27
CALD1-204ENST00000417172 SLC45A2Q9UMX9 530 aa13.34□□□□□ -0.27
CALD1-204ENST00000417172 I3L521 148 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 LINC00869P0C866 280 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 IGLV11-55A0A075B6I3 123 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 CORTO00230 105 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PRR20EP86478 221 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PRR20CP86479 221 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PRR20DP86480 221 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PRR20BP86481 221 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PRR20AP86496 221 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 DPPA3Q6W0C5 159 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 SMR3AQ99954 134 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 SLC39A9Q9NUM3 307 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 PITPNC1Q9UKF7 332 aa13.33□□□□□ -0.28
CALD1-204ENST00000417172 ZFP92A6NM28 416 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 OR2J3O76001 311 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 RPL29P47914 159 aaKnown RBP13.32□□□□□ -0.28
CALD1-204ENST00000417172 RAB31Q13636 194 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 TOR2AQ5JU69 321 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 Q6YL49 198 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 DUX5Q96PT3 197 aa13.32□□□□□ -0.28
CALD1-204ENST00000417172 HOXA3O43365 443 aaPredicted RBP13.31□□□□□ -0.28
CALD1-204ENST00000417172 SOX15O60248 233 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 NDUFB8O95169 186 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 IGHV3-23P01764 117 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 ACOT6Q3I5F7 207 aaPredicted RBP13.31□□□□□ -0.28
CALD1-204ENST00000417172 ETFRF1Q6IPR1 90 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 IL34Q6ZMJ4 242 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 CYP2G1PQ6ZSU1 146 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 TMEM116Q8NCL8 245 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 NOL4LQ96MY1 436 aaPredicted RBP13.31□□□□□ -0.28
CALD1-204ENST00000417172 ANK3Q12955 4377 aaKnown RBP13.31□□□□□ -0.28
CALD1-204ENST00000417172 MAP1LC3B2A6NCE7 125 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 CD5LO43866 347 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 TMEM95Q3KNT9 176 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 SPATA31B1PQ5VZV4 182 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 FAM110DQ8TAY7 271 aaPredicted RBP13.31□□□□□ -0.28
CALD1-204ENST00000417172 RAB24Q969Q5 203 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 LINC00052Q96N35 136 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 MAP1LC3BQ9GZQ8 125 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 YAE1D1Q9NRH1 226 aa13.31□□□□□ -0.28
CALD1-204ENST00000417172 MBP02144 154 aa13.3□□□□□ -0.28
CALD1-204ENST00000417172 EIF4E3Q8N5X7 224 aaKnown RBP13.3□□□□□ -0.28
CALD1-204ENST00000417172 SCRT1Q9BWW7 348 aa13.3□□□□□ -0.28
CALD1-204ENST00000417172 TMPRSS5Q9H3S3 457 aa13.3□□□□□ -0.28
CALD1-204ENST00000417172 SEPSECSQ9HD40 501 aaKnown RBP13.3□□□□□ -0.28
CALD1-204ENST00000417172 TCRBV4S1A1TA0A5B7 111 aa13.29□□□□□ -0.28
CALD1-204ENST00000417172 RAB19A4D1S5 217 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms