RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 MST1P26927 711 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 ZCCHC24Q8N2G6 241 aaKnown RBP10.04□□□□□ -0.8
UBR4-205ENST00000417040 TMEM101Q96IK0 257 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 LOXL4Q96JB6 756 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 ZNF581Q9P0T4 197 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 SUPT4H1P63272 117 aaKnown RBP10.04□□□□□ -0.8
UBR4-205ENST00000417040 ACTL10Q5JWF8 245 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 GTSF1LQ9H1H1 148 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 ZNF703Q9H7S9 590 aaPredicted RBP10.04□□□□□ -0.8
UBR4-205ENST00000417040 ZNF815PA8K554 130 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 EREGO14944 169 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 HBDP02042 147 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 UMODP07911 640 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 ZNF497Q6ZNH5 498 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 PARP14Q460N5 1801 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 STPG1Q5TH74 334 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 PPP1R27Q86WC6 154 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 ARPC1AQ92747 370 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 KNL1Q8NG31 2342 aa10.04□□□□□ -0.8
UBR4-205ENST00000417040 CD300EQ496F6 205 aaPredicted RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 PPP1R32Q7Z5V6 425 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 FDCSPQ8NFU4 85 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 OR4X2Q8NGF9 303 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 GTF3AQ92664 365 aaKnown RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 C11orf68Q9H3H3 251 aaKnown RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 ZNF138P52744 262 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 Q6ZT83 130 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 OSR1Q8TAX0 266 aaPredicted RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 C15orf61A6NNL5 157 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 UPK2O00526 184 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 STAG3L3P0CL85 134 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 ZNF479Q96JC4 524 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 IGHV2OR16-5A0A0B4J2B6 119 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 A0A1B0GUS0 222 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 MORN2Q502X0 79 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 C1orf194Q5T5A4 169 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 OR2K2Q8NGT1 345 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 WBP1Q96G27 269 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 RNF115Q9Y4L5 304 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 PSME4Q14997 1843 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 NDUFS8O00217 210 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 IFI6P09912 130 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 CIARTQ8N365 385 aaPredicted RBP10.03□□□□□ -0.8
UBR4-205ENST00000417040 PIMREGQ9BSJ6 248 aa10.03□□□□□ -0.8
UBR4-205ENST00000417040 C5orf63A6NC05 138 aa10.02□□□□□ -0.8
UBR4-205ENST00000417040 NPIPB13A6NJU9 1138 aa10.02□□□□□ -0.8
UBR4-205ENST00000417040 CD7P09564 240 aa10.02□□□□□ -0.8
UBR4-205ENST00000417040 MYOD1P15172 320 aa10.02□□□□□ -0.8
UBR4-205ENST00000417040 GAGE13Q4V321 117 aa10.02□□□□□ -0.8
UBR4-205ENST00000417040 NDUFA2O43678 99 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 OSTCQ9NRP0 149 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 TRAV21A0A0B4J279 112 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 IFNL4K9M1U5 179 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 LINC00205P59089 165 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 BSPH1Q075Z2 132 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 IGKV1-12A0A0C4DH73 117 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 A0A1W2PRX2 142 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 IGKV1D-12P01611 117 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 GUSBP1Q15486 140 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 A0A0G2JLM5 398 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 EXOC3-AS1Q8N2X6 119 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 PSG8Q9UQ74 426 aa10.02□□□□□ -0.81
UBR4-205ENST00000417040 CNTFRP26992 372 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 MPV17L2Q567V2 206 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 TMEM144Q7Z5S9 345 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 LINC01587Q99440 93 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 ID3Q02535 119 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 SRSF1Q07955 248 aaKnown RBP eCLIP10.01□□□□□ -0.81
UBR4-205ENST00000417040 SCRT1Q9BWW7 348 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 ST20Q9HBF5 79 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 IGKV1-27A0A075B6S5 117 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 NPIPB5A8MRT5 1133 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 D6R8Y8 96 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 CDKN1AP38936 164 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 TRAV3A0A0B4J244 114 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 MGST2Q99735 147 aa10.01□□□□□ -0.81
UBR4-205ENST00000417040 SEPSECSQ9HD40 501 aaKnown RBP10.01□□□□□ -0.81
UBR4-205ENST00000417040 TCRBV4S1A1TA0A5B7 111 aa10□□□□□ -0.81
UBR4-205ENST00000417040 TREML4Q6UXN2 200 aa10□□□□□ -0.81
UBR4-205ENST00000417040 KLHDC3Q9BQ90 382 aa10□□□□□ -0.81
UBR4-205ENST00000417040 TDGF1P13385 188 aa10□□□□□ -0.81
UBR4-205ENST00000417040 IFI27L1Q96BM0 104 aa10□□□□□ -0.81
UBR4-205ENST00000417040 CHCHD1Q96BP2 118 aaKnown RBP10□□□□□ -0.81
UBR4-205ENST00000417040 IGHV3-73A0A0B4J1V6 119 aa10□□□□□ -0.81
UBR4-205ENST00000417040 LYNX1G3V0Z9 82 aa10□□□□□ -0.81
UBR4-205ENST00000417040 H3BRM9 83 aa10□□□□□ -0.81
UBR4-205ENST00000417040 LYNX1P0DP58 116 aa10□□□□□ -0.81
UBR4-205ENST00000417040 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
UBR4-205ENST00000417040 TSKUQ8WUA8 353 aa10□□□□□ -0.81
UBR4-205ENST00000417040 SMAD7O15105 426 aaKnown RBP10□□□□□ -0.81
UBR4-205ENST00000417040 ZNF436-AS1Q8NC38 126 aaPredicted RBP10□□□□□ -0.81
UBR4-205ENST00000417040 VCX2Q9H322 139 aa10□□□□□ -0.81
UBR4-205ENST00000417040 C3orf79P0CE67 100 aa10□□□□□ -0.81
UBR4-205ENST00000417040 BCL6BQ8N143 479 aaPredicted RBP10□□□□□ -0.81
UBR4-205ENST00000417040 FABP5P3A8MUU1 101 aa9.99□□□□□ -0.81
UBR4-205ENST00000417040 IQCF6A8MYZ5 107 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms