RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 SGPP2Q8IWX5 399 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 MIR7-3HGQ8N6C7 128 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF615Q8N8J6 731 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM105Q8N8V8 129 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ST20-AS1Q8NBB2 130 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR2M3Q8NG83 312 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR8A1Q8NGG7 326 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 S100ZQ8WXG8 99 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 MALSU1Q96EH3 234 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ACY3Q96HD9 319 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TSPAN32Q96QS1 320 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 PRSS27Q9BQR3 290 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 DERL1Q9BUN8 251 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF443Q9Y2A4 671 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 MED31Q9Y3C7 131 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 PTPRKQ15262 1439 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 TRIP11Q15643 1979 aa2.9□□□□□ -1.95
HMGB1P13-201ENST00000406019 A0A0G2JMM0 328 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 A0A1W2PPB8 328 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 HFM1A2PYH4 1435 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 C7orf71A4D174 169 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 KIR3DP1A8MWS1 328 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 NPFFO15130 113 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATRNO75882 1429 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 SCTP09683 121 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGLC6P0CF74 106 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 AKAIN1P0CW23 69 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF728P0DKX0 622 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR12D1P0DN82 309 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 HLA-EP13747 358 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATF1P18846 271 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATP6V0CP27449 155 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 IL15RAQ13261 267 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 EIF4EBP1Q13541 118 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 CLEC12BQ2HXU8 276 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 C12orf74Q32Q52 190 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 TDRG1Q3Y452 100 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 NXNL2Q5VZ03 156 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF880Q6PDB4 577 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 UNQ5815/PRO19632Q6UWF5 114 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 FOXI2Q6ZQN5 318 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 DAZ4Q86SG3 579 aaKnown RBP2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 DOCK3Q8IZD9 2030 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 HIST3H2BBQ8N257 126 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 DEFB125Q8N687 156 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR5A1Q8NGJ0 315 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 RTN4IP1Q8WWV3 396 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 ADAT3Q96EY9 351 aaPredicted RBP2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 MIEN1Q9BRT3 115 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 TMEM147Q9BVK8 224 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 DAZ1Q9NQZ3 744 aaKnown RBP2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 FBXL12Q9NXK8 326 aa2.89□□□□□ -1.95
HMGB1P13-201ENST00000406019 COL4A4P53420 1690 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF106Q9H2Y7 1883 aaKnown RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 TICRRQ7Z2Z1 1910 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 MYH2Q9UKX2 1941 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 FAM236AA0A1B0GUQ0 79 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 FAM236BA0A1B0GV22 79 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 A0A1W2PRS3 328 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF670-ZNF695F2Z2N8 137 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 J3QQQ9 107 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ARL6IP5O75915 188 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGHV1-46P01743 117 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CD14P08571 375 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR4A8P0C604 315 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR5AC1P0C628 307 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 FKBP2P26885 142 aaKnown RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ATP5G3P48201 142 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CTBP2P56545 445 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 UBA52P62987 128 aaKnown RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CATR1Q13166 79 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ZNF705AQ6ZN79 300 aaPredicted RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 GTF2H5Q6ZYL4 71 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 MARCH3Q86UD3 253 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 SVBPQ8N300 66 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 KRTCAP2Q8N6L1 136 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 LINC00301Q8NCQ3 95 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 LMX1AQ8TE12 382 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 MAGOHBQ96A72 148 aaKnown RBP2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 SLAMF6Q96DU3 332 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGF2BP2-AS1Q96M15 143 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 SDF2Q99470 211 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CHST6Q9GZX3 395 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 FAM60AQ9NP50 221 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 KCNIP2Q9NS61 270 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 ASF1BQ9NVP2 202 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CYSLTR1Q9Y271 337 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 MYOM2P54296 1465 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CUL7Q14999 1698 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 CTTNBP2Q8WZ74 1663 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 SLIT3O75094 1523 aa2.88□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGLV4-60A0A075B6I1 120 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 C7orf66A4D0T2 115 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 IZUMO1RA6ND01 250 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 D6RAR5 112 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 OVOL1O14753 267 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 OR2T1O43869 369 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 IL4P05112 153 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 NMBP08949 121 aa2.87□□□□□ -1.95
HMGB1P13-201ENST00000406019 IGLC1P0CG04 106 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms