RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 GIMAP1Q8WWP7 306 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 NRGNQ92686 78 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ARL11Q969Q4 196 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 GALMQ96C23 342 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 TMEM101Q96IK0 257 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 CYYR1Q96J86 154 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF714Q96N38 554 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 SCGB3A2Q96PL1 93 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 YPEL2Q96QA6 119 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 FOXC2Q99958 501 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 GAL3ST2Q9H3Q3 398 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 CALYQ9NYX4 217 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 DUX4Q9UBX2 424 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 RPUSD1Q9UJJ7 312 aaKnown RBP3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 JPT1Q9UK76 154 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 NAV3Q8IVL0 2385 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ITPR3Q14573 2671 aa3.32□□□□□ -1.88
HMGB3P19-201ENST00000403971 ASH1LQ9NR48 2969 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TLN2Q9Y4G6 2542 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 NOTCH2Q04721 2471 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 A0A096LNT2 108 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGKV1-6A0A0C4DH72 117 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 C17orf98A8MV24 154 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 M0R1W7 72 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ENSAO43768 121 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 SLC22A5O76082 557 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 NDUFB6O95139 128 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 SNAPINO95295 136 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 PPYP01298 95 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 HBZP02008 142 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 PMP2P02689 132 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TFF1P04155 84 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TCRBP04435 133 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 USF1P22415 310 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 CD34P28906 385 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 CEACAM6P40199 344 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 UBE2MP61081 183 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TSPAN5P62079 268 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 DAZ2Q13117 558 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MSMO1Q15800 293 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MORN2Q502X0 79 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 AADACL3Q5VUY0 350 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 LPCAT3Q6P1A2 487 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 PLET1Q6UQ28 207 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 IDO2Q6ZQW0 420 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 H1FOOQ8IZA3 346 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 C6orf223Q8N319 242 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 LINC00311Q8N616 119 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TPRX1Q8N7U7 411 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZDHHC22Q8N966 263 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR51S1Q8NGJ8 323 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR13C8Q8NGS7 320 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR10J5Q8NHC4 309 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF596Q8TC21 504 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZFAND1Q8TCF1 268 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MAFIPQ8WZ33 124 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 H1FXQ92522 213 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TNFRSF14Q92956 283 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 CREB3L1Q96BA8 519 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 GINS4Q9BRT9 223 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MARVELD1Q9BSK0 173 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ALX4Q9H161 411 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 DAZ3Q9NR90 486 aaKnown RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 C19orf12Q9NSK7 152 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MCUBQ9NWR8 336 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 IDI2-AS1Q9NZ38 188 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 NUBP2Q9Y5Y2 271 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 KPTNQ9Y664 436 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 MAP1AP78559 2803 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 PLXNB1O43157 2135 aa3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 TET2Q6N021 2002 aaPredicted RBP3.31□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF469Q96JG9 3925 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 FLNBO75369 2602 aaKnown RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 FLNAP21333 2647 aaKnown RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 ACANP16112 2415 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV3OR16-13A0A075B7E8 117 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 TRAV39A0A0B4J263 110 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 LINC00854A0A1B0GVQ3 168 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 WI2-2373I1.2A0A1W2PRP0 233 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 HELTA6NFD8 242 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 OR5H14A6NHG9 310 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 B4DSR2 109 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 SDCBPO00560 298 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 BET1O15155 118 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 ATP5LO75964 103 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 DHFRP00374 187 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 IL5P05113 134 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 CTSDP07339 412 aaPredicted RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 IGHV1-8P0DP01 117 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 CCL3L1P16619 93 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 PRTN3P24158 256 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 COX7A1P24310 79 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 SSTR5P35346 364 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 RAB7AP51149 207 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 CCR6P51684 374 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF137PP52743 207 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 TAS2R31P59538 309 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 SCGB2B2Q4G0G5 96 aa3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 SLC25A48Q6ZT89 311 aaKnown RBP3.3□□□□□ -1.88
HMGB3P19-201ENST00000403971 ZNF436-AS1Q8NC38 126 aaPredicted RBP3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms