RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 IGKV1D-43A0A0B4J1Z2 117 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 TMEM170BQ5T4T1 132 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 SPATA31B1PQ5VZV4 182 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 MTURNQ8N3F0 131 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 A0A087X0M5 115 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 A0A1B0GX30 115 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 H3BVH4 76 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 SRSF1Q07955 248 aaKnown RBP eCLIP5.94□□□□□ -1.46
CCDC171-201ENST00000380701 NSUN5P1Q3KNT7 163 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 DNLZQ5SXM8 178 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 FAM201AQ5SY85 155 aa5.94□□□□□ -1.46
CCDC171-201ENST00000380701 TYMSP04818 313 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 WFDC6Q9BQY6 131 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 EPDR1Q9UM22 224 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 RALGAPA2Q2PPJ7 1873 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 TGIF2-C20orf24A0A0A6YYL0 155 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 H3BUX3 64 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 GATA4P43694 442 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 FAM90A2PQ658T7 463 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 ISOC2Q96AB3 205 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 PINLYPA6NC86 204 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 RHODO00212 210 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 LYPD3O95274 346 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 APOMO95445 188 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 Q5PR19 223 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF324BQ6AW86 544 aaPredicted RBP5.93□□□□□ -1.46
CCDC171-201ENST00000380701 C1QL2Q7Z5L3 287 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 C18orf12Q96KH6 178 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 SLC25A2Q9BXI2 301 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 ZDBF2Q9HCK1 2354 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 BRCA1P38398 1863 aaKnown RBP5.93□□□□□ -1.46
CCDC171-201ENST00000380701 ID3Q02535 119 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 OR10W1Q8NGF6 305 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 RGP1Q92546 391 aaPredicted RBP5.93□□□□□ -1.46
CCDC171-201ENST00000380701 LOC107984156A0A0G2JMH3 177 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 PRR32B1ATL7 298 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 CEACAM8P31997 349 aaPredicted RBP5.93□□□□□ -1.46
CCDC171-201ENST00000380701 ARL17AQ8IVW1 177 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 NABP1Q96AH0 204 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 PSG8Q9UQ74 426 aa5.93□□□□□ -1.46
CCDC171-201ENST00000380701 NDUFB8O95169 186 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 TMEM50AO95807 157 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 PIP4P2Q8N4L2 257 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 KLF2Q9Y5W3 355 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3-35A0A0C4DH35 117 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 FOXF2Q12947 444 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF585BQ52M93 769 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 TMEM200BQ69YZ2 307 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 XIRP1Q702N8 1843 aaKnown RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 SBF2Q86WG5 1849 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 ETV2O00321 342 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 CGAP01215 116 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 FHITP49789 147 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 APOC4P55056 127 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 CBLN2Q8IUK8 224 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 IMMP2LQ96T52 175 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 PEF1Q9UBV8 284 aaKnown RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 PLXNA1Q9UIW2 1896 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 IGKV3OR2-268A0A0C4DH90 116 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 RASL11AQ6T310 242 aa5.92□□□□□ -1.46
CCDC171-201ENST00000380701 SDHCQ99643 169 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 RTBDNQ9BSG5 229 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 DAZ1Q9NQZ3 744 aaKnown RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 AURKAIP1Q9NWT8 199 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 COL11A1P12107 1806 aaPredicted RBP5.92□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3OR16-13A0A075B7E8 117 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 IGHV3-74A0A0B4J1X5 117 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 GAGE10A6NGK3 116 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 BUB1B-PAK6H3BSN5 160 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 H3BUA1 57 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 PDE6HQ13956 83 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 C15orf32Q32M92 178 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF837Q96EG3 531 aaPredicted RBP5.91□□□□□ -1.46
CCDC171-201ENST00000380701 CHCHD5Q9BSY4 110 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF815PA8K554 130 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 ADARB2-AS1A8MUL3 147 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 TBX6O95947 436 aaPredicted RBP5.91□□□□□ -1.46
CCDC171-201ENST00000380701 PLNP26678 52 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 SUPT4H1P63272 117 aaKnown RBP5.91□□□□□ -1.46
CCDC171-201ENST00000380701 RNF182Q8N6D2 247 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 OVOL2Q9BRP0 275 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 F11RQ9Y624 299 aaKnown RBP5.91□□□□□ -1.46
CCDC171-201ENST00000380701 TRAV8-6A0A0B4J262 113 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 TEX48A0A1B0GUV7 120 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 C7orf71A4D174 169 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 GAS1P54826 345 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 SPATA45Q537H7 98 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 PIP4P1Q86T03 277 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 LY96Q9Y6Y9 160 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 TRBV7-9A0A0J9YWB2 115 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 TRGC2P03986 189 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 CD55P08174 381 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 ZNF138P52744 262 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 FAM110DQ8TAY7 271 aaPredicted RBP5.91□□□□□ -1.46
CCDC171-201ENST00000380701 CRIM1Q9NZV1 1036 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 MIA3Q5JRA6 1907 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 DMRTA2Q96SC8 542 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 PAM16Q9Y3D7 125 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 MPTX1A8MV57 137 aa5.91□□□□□ -1.46
CCDC171-201ENST00000380701 PSPNO60542 156 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms