RNA–Protein interactions for RNA: ENST00000377394.7

SF1-205, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-205ENST00000377394 FOXA2Q9Y261 457 aaPredicted RBP11.3□□□□□ -0.6
SF1-205ENST00000377394 TRAV8-6A0A0B4J262 113 aa11.3□□□□□ -0.6
SF1-205ENST00000377394 HSPE1P61604 102 aaKnown RBP11.3□□□□□ -0.6
SF1-205ENST00000377394 BVES-AS1Q5T3Y7 98 aa11.3□□□□□ -0.6
SF1-205ENST00000377394 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
SF1-205ENST00000377394 CHODLQ9H9P2 273 aa11.3□□□□□ -0.6
SF1-205ENST00000377394 hDV102S1A0JD36 115 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 SH2D7A6NKC9 451 aaPredicted RBP11.29□□□□□ -0.6
SF1-205ENST00000377394 M0R2Z0 102 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 APCSP02743 223 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 MT-ND6P03923 174 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 NPY1RP25929 384 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 K7ERU9 68 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 HSBP1O75506 76 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 GOSR1O95249 250 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 MYOD1P15172 320 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 DUX4L9Q6RFH8 374 aaPredicted RBP11.29□□□□□ -0.6
SF1-205ENST00000377394 ZNF841Q6ZN19 808 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 LHFPL4Q7Z7J7 247 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 ITLN1Q8WWA0 313 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 IDI2-AS1Q9NZ38 188 aa11.29□□□□□ -0.6
SF1-205ENST00000377394 KBTBD11-OT1A0A1B0GTJ5 212 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 MBD3L4A6NDZ8 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 MBD3L3A6NE82 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 MBD3L5A6NJ08 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 C2orf70A6NJV1 201 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 SPRY3O43610 288 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 AMY1AP04745 511 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 GPR6P46095 362 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 UBE2G1P62253 170 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 TBR1Q16650 682 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 OR8B3Q8NGG8 313 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 MBD3L2Q8NHZ7 208 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 OR8B2Q96RD0 313 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 SERTAD4Q9NUC0 356 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 M0R1B8 84 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 CRYBB3P26998 211 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 GNG4P50150 75 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 PRR20EP86478 221 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 PRR20CP86479 221 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 PRR20DP86480 221 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 PRR20BP86481 221 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 PRR20AP86496 221 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 FAM222BQ8WU58 562 aa11.28□□□□□ -0.6
SF1-205ENST00000377394 ZNF430Q9H8G1 570 aaPredicted RBP11.28□□□□□ -0.6
SF1-205ENST00000377394 GLRXP35754 106 aa11.27□□□□□ -0.6
SF1-205ENST00000377394 ZNF474Q6S9Z5 364 aaPredicted RBP11.27□□□□□ -0.6
SF1-205ENST00000377394 DEFB125Q8N687 156 aa11.27□□□□□ -0.6
SF1-205ENST00000377394 FAM168AQ92567 244 aa11.27□□□□□ -0.6
SF1-205ENST00000377394 C11orf52Q96A22 123 aa11.27□□□□□ -0.6
SF1-205ENST00000377394 SSBP3Q9BWW4 388 aaPredicted RBP11.27□□□□□ -0.6
SF1-205ENST00000377394 TRGV10A0A0A0MS01 117 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 C9JCJ5 164 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 HSBP1L1C9JCN9 74 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 LINC00869P0C866 280 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 IGFBP2P18065 325 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 USF1P22415 310 aaPredicted RBP11.27□□□□□ -0.61
SF1-205ENST00000377394 RPL8P62917 257 aaKnown RBP11.27□□□□□ -0.61
SF1-205ENST00000377394 FOXE3Q13461 319 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 POU2AF1Q16633 256 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 PIP4P1Q86T03 277 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 SPACA3Q8IXA5 215 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 ARL2-SNX15V9GYD0 113 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 CADP27708 2225 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 DSCAMO60469 2012 aa11.27□□□□□ -0.61
SF1-205ENST00000377394 IGLV3-9A0A075B6K5 115 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 RPS20P60866 119 aaKnown RBP11.26□□□□□ -0.61
SF1-205ENST00000377394 LINC00173Q6ZV60 143 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 NHLRC2Q8NBF2 726 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 MCRIP2Q9BUT9 160 aaKnown RBP11.26□□□□□ -0.61
SF1-205ENST00000377394 HELTA6NFD8 242 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 CORTO00230 105 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 TOX4O94842 621 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 HLA-DQA1P01909 254 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 NBEAP1P0C6P0 100 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 GATA4P43694 442 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 TIMM23BQ5SRD1 257 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 GDF5OSQ5U4N7 250 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 SMIM12Q96EX1 92 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 OR4C46A6NHA9 309 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 MGST1P10620 155 aaKnown RBP11.26□□□□□ -0.61
SF1-205ENST00000377394 MIR17HGQ75NE6 70 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 SSBP4Q9BWG4 385 aaPredicted RBP11.26□□□□□ -0.61
SF1-205ENST00000377394 ENY2Q9NPA8 101 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 TNFRSF19Q9NS68 423 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 OR51B2Q9Y5P1 312 aa11.26□□□□□ -0.61
SF1-205ENST00000377394 DSCAML1Q8TD84 2053 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 A0A087X0K7 114 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 PRSS47A8MTI9 375 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 FNDC10F2Z333 226 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 ACTL6BO94805 426 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 RAB31Q13636 194 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 DEFB109BQ30KR1 87 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 ADTRPQ96IZ2 230 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 GCM1Q9NP62 436 aa11.25□□□□□ -0.61
SF1-205ENST00000377394 RAB9BQ9NP90 201 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms