RNA–Protein interactions for RNA: ENST00000371122.8

SMARCA1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCA1, Length 4,099 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-202ENST00000371122 ATP5J2P56134 94 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 RPL24P83731 157 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 CFAP47Q6ZTR5 3102 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 FN1P02751 2386 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF462Q96JM2 2506 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 LOC105371242A0A075B767 164 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF729A6NN14 1252 aaPredicted RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 A8MWL6 223 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 DDTP30046 118 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 MC5RP33032 325 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 DUTP33316 252 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 Q1RN00 199 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 TCF24Q7RTU0 167 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 C11orf44Q8N8P7 122 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 OR5R1Q8NH85 324 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 SFXN3Q9BWM7 321 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 CLEC7AQ9BXN2 247 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 MED12LQ86YW9 2145 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 FAM90A26D6RGX4 464 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 FGF16O43320 207 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 MPDU1O75352 247 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 IGHV1-46P01743 117 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 BPIFA4PQ86YQ2 179 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 SLC25A33Q9BSK2 321 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 SEPSECSQ9HD40 501 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 GSN-AS1Q9NRJ2 163 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 F11RQ9Y624 299 aaKnown RBP7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 MTORP42345 2549 aa7.55□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF106Q9H2Y7 1883 aaKnown RBP7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 TM4SF20Q53R12 229 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 OCC1Q8TAD7 63 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 MARVELD3Q96A59 401 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 IFI27L2Q9H2X8 130 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 SDF2L1Q9HCN8 221 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 TNRC6BQ9UPQ9 1833 aaKnown RBP7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BKO60814 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 FOXH1O75593 365 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BJP06899 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BOP23527 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 GPR183P32249 361 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BBP33778 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BDP58876 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 PKIAP61925 76 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BCP62807 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST2H2BEQ16778 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 ASCL5Q7RTU5 278 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 GLMPQ8WWB7 406 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 ZCCHC14Q8WYQ9 949 aaKnown RBP7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BHQ93079 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 COQ2Q96H96 371 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 C16orf92Q96LL3 132 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 DUX5Q96PT3 197 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BNQ99877 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 HIST1H2BMQ99879 126 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 POLQO75417 2590 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 A0A1B0GUS0 222 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 CORTO00230 105 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 GZMBP10144 247 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 MAS1LP35410 378 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 KLRD1Q13241 179 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 LINC00479Q96M42 142 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 MUC3AQ02505 3323 aa7.54□□□□□ -1.2
SMARCA1-202ENST00000371122 TEX50A0A1B0GTY4 177 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 ISLRO14498 428 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 IGKV1-16P04430 117 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF883P0CG24 379 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 CKS2P33552 79 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 FAM74A4Q5TZK3 123 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 TMEM191AQ9H0A3 160 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 SMDT1Q9H4I9 107 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 COLCA2A8K830 154 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 IFNL4K9M1U5 179 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 SCGB1C2P0DMR2 95 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 HOXB1P14653 301 aaPredicted RBP7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 SRD5A1P18405 259 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 RIGQ13278 110 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 IGFL4Q6B9Z1 124 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 CYP2G1PQ6ZSU1 146 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 DIRC2Q96SL1 478 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 PSMG3Q9BT73 122 aaPredicted RBP7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 BET1LQ9NYM9 111 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 TANC2Q9HCD6 1990 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 TMEM189A5PLL7 270 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 PLA2G5P39877 138 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 SPATA45Q537H7 98 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 SCGB1D4Q6XE38 83 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF738Q8NE65 137 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 ZNF502Q8TBZ5 544 aa7.53□□□□□ -1.2
SMARCA1-202ENST00000371122 OR2T8A6NH00 312 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 LIPFP07098 398 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 CEACAM1P13688 526 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 APOBEC3AP31941 199 aaPredicted RBP7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 FXYD7P58549 80 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 PMCHL1Q16048 86 aa7.52□□□□□ -1.2
SMARCA1-202ENST00000371122 NMSQ5H8A3 153 aa7.52□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms