RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 LIMS1P48059 325 aa9.87□□□□□ -0.83
SHANK2-201ENST00000338508 SHANK3Q9BYB0 1731 aa9.87□□□□□ -0.83
SHANK2-201ENST00000338508 NDPQ00604 133 aa9.87□□□□□ -0.83
SHANK2-201ENST00000338508 TRBV5-5A0A0J9YX44 114 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 CA7P43166 264 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 RPL15P61313 204 aaKnown RBP9.86□□□□□ -0.83
SHANK2-201ENST00000338508 KLRD1Q13241 179 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 IRF3Q14653 427 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 C9orf106Q8NAJ2 232 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 NPIPB13A6NJU9 1138 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 NPIPB5A8MRT5 1133 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 PYYP10082 97 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 ANAPC13Q9BS18 74 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 IGKV2-40A0A087WW87 121 aaPredicted RBP9.86□□□□□ -0.83
SHANK2-201ENST00000338508 MPTX1A8MV57 137 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 TM4SF5O14894 197 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 IGKV2D-40P01614 121 aaPredicted RBP9.86□□□□□ -0.83
SHANK2-201ENST00000338508 SRSF1Q07955 248 aaKnown RBP eCLIP9.86□□□□□ -0.83
SHANK2-201ENST00000338508 SIGLEC15Q6ZMC9 328 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 RCC1LQ96I51 464 aaKnown RBP9.86□□□□□ -0.83
SHANK2-201ENST00000338508 ARAP2Q8WZ64 1704 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A10PA6NDY2 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A18PA6NE21 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A16PA6NEW6 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A20PA6NIJ5 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A8PA6NJQ4 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A7PA6NKC0 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 C17orf100A8MU93 164 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A22PA8MWA6 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A12PA8MX19 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A5PA8MXJ8 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A23PA8MXZ1 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 NMBP08949 121 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A15PP0C7V4 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A13PP0C7W8 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A14PP0C7W9 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 FAM90A24PP0C7X0 464 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 CFHR3Q02985 330 aa9.86□□□□□ -0.83
SHANK2-201ENST00000338508 EP300Q09472 2414 aaPredicted RBP9.85□□□□□ -0.83
SHANK2-201ENST00000338508 SAA2-SAA4A0A096LPE2 208 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 C4orf51C9J302 202 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 LHBP01229 141 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 SAA2P0DJI9 122 aaPredicted RBP9.85□□□□□ -0.83
SHANK2-201ENST00000338508 PLNP26678 52 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 PSG7Q13046 419 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 OSR1Q8TAX0 266 aaPredicted RBP9.85□□□□□ -0.83
SHANK2-201ENST00000338508 QSER1Q2KHR3 1735 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 PAX8Q06710 450 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 FOXL1Q12952 345 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 Q5BKY6 102 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 LRRK1Q38SD2 2015 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 PHF3Q92576 2039 aaKnown RBP9.85□□□□□ -0.83
SHANK2-201ENST00000338508 CLPSP04118 112 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 C1orf53Q5VUE5 145 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 THBDP07204 575 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 FREM3P0C091 2139 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 RBM38Q9H0Z9 239 aaKnown RBP9.85□□□□□ -0.83
SHANK2-201ENST00000338508 BRD3OSQ6XYD6 125 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 CYSLTR1Q9Y271 337 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 COL6A6A6NMZ7 2263 aa9.85□□□□□ -0.83
SHANK2-201ENST00000338508 KIAA1551Q9HCM1 1747 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 RAMP3O60896 148 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 PRTN3P24158 256 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 LCNL1Q6ZST4 164 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ORAOV1Q8WV07 137 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DUSP14O95147 198 aaKnown RBP9.84□□□□□ -0.83
SHANK2-201ENST00000338508 FAM209AQ5JX71 171 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 RNASE6Q93091 150 aaKnown RBP9.84□□□□□ -0.83
SHANK2-201ENST00000338508 SLC25A38Q96DW6 304 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ANAPC10Q9UM13 185 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ANXA2RQ3ZCQ2 193 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ZNF407Q9C0G0 2248 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DPM2O94777 84 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 WNT2P09544 360 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DEFB130BP0DP73 79 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DEFB130AP0DP74 79 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 MS4A6AQ9H2W1 248 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DEPPQ9NTK1 212 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.84□□□□□ -0.835e-8■■□□□ 12.9
SHANK2-201ENST00000338508 ADMP35318 185 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 CSRP2Q16527 193 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 RIPPLY2Q5TAB7 128 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 KLHL30-AS1Q8NEE0 82 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ZNF837Q96EG3 531 aaPredicted RBP9.84□□□□□ -0.83
SHANK2-201ENST00000338508 WDYHV1Q96HA8 205 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 DYSFO75923 2080 aa9.84□□□□□ -0.83
SHANK2-201ENST00000338508 ARFGEF1Q9Y6D6 1849 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 TGFBR3LH3BV60 316 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 CEACAM1P13688 526 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 DMRTC2Q8IXT2 367 aaPredicted RBP9.83□□□□□ -0.84
SHANK2-201ENST00000338508 CIARTQ8N365 385 aaPredicted RBP9.83□□□□□ -0.84
SHANK2-201ENST00000338508 OR10W1Q8NGF6 305 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 RNF125Q96EQ8 232 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 A0A0G2JK05 382 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 IZUMO1RA6ND01 250 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 TIMM23O14925 209 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 C6orf226Q5I0X4 101 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 GTF3AQ92664 365 aaKnown RBP9.83□□□□□ -0.84
SHANK2-201ENST00000338508 ASCL2Q99929 193 aa9.83□□□□□ -0.84
SHANK2-201ENST00000338508 NAA38Q9BRA0 125 aaKnown RBP9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 203.9 ms