RNA–Protein interactions for RNA: ENST00000324340.13

DDX39A-202, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-202ENST00000324340 REG1BP48304 166 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 ID3Q02535 119 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 C21orf62-AS1Q17RA5 79 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 BSXQ3C1V8 233 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 Q6ZRM9 215 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 OR2T10Q8NGZ9 312 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 OSR1Q8TAX0 266 aaPredicted RBP10.27□□□□□ -0.76
DDX39A-202ENST00000324340 RPEQ96AT9 228 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 RBKSQ9H477 322 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 WASHC3Q9Y3C0 194 aa10.27□□□□□ -0.76
DDX39A-202ENST00000324340 FAM24AA6NFZ4 105 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 SCGB1D1O95968 90 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 IGKV1-16P04430 117 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 TMEM177Q53S58 311 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 CYB5R2Q6BCY4 276 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 SLC24A4Q8NFF2 622 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 LHX4Q969G2 390 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 HIF1ANQ9NWT6 349 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 AURKAIP1Q9NWT8 199 aaPredicted RBP10.26□□□□□ -0.77
DDX39A-202ENST00000324340 ANKRD17O75179 2603 aaKnown RBP10.26□□□□□ -0.77
DDX39A-202ENST00000324340 CR1P17927 2039 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 APCP25054 2843 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 CENPVL3A0A0U1RRI6 287 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 J3QLI3 93 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 IGHV4-31P0DP07 118 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 CEBPGP53567 150 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 TMEM249Q2WGJ8 235 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 AARDQ4LEZ3 155 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 LEMD1Q68G75 181 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 SSX7Q7RTT5 188 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 H2BFWTQ7Z2G1 175 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 C16orf82Q7Z2V1 217 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 LHFPL4Q7Z7J7 247 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 OR4C13Q8NGP0 309 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 OR5C1Q8NGR4 320 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 AJUBAQ96IF1 538 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 MS4A10Q96PG2 267 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 RAB40CQ96S21 281 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 GNG13Q9P2W3 67 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 CACNG5Q9UF02 275 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 TIMM9Q9Y5J7 89 aa10.26□□□□□ -0.77
DDX39A-202ENST00000324340 TACC2O95359 2948 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 RPL29P47914 159 aaKnown RBP10.25□□□□□ -0.77
DDX39A-202ENST00000324340 DYNLT3P51808 116 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 LGALS4P56470 323 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 TPPP2P59282 170 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 ERVK-16P61578 105 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 RBX1P62877 108 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 IZUMO4Q1ZYL8 232 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 DMRTA1Q5VZB9 504 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 ZNF705AQ6ZN79 300 aaPredicted RBP10.25□□□□□ -0.77
DDX39A-202ENST00000324340 WFDC11Q8NEX6 87 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 OR4B1Q8NGF8 309 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 CFHR4Q92496 578 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 FLYWCH2Q96CP2 140 aaKnown RBP10.25□□□□□ -0.77
DDX39A-202ENST00000324340 SMIM7Q9BQ49 75 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 C7orf69Q9H7B7 122 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 FUT9Q9Y231 359 aa10.25□□□□□ -0.77
DDX39A-202ENST00000324340 IGHV1-69DA0A0B4J2H0 117 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 SRRM4A7MD48 611 aaKnown RBP10.24□□□□□ -0.77
DDX39A-202ENST00000324340 FAM90A26D6RGX4 464 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 NPFFO15130 113 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 IGHV1-69P01742 117 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 CD1BP29016 333 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 ELLP55199 621 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-202ENST00000324340 FOXL1Q12952 345 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 MOB3BQ86TA1 216 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 DYNAPQ8N1N2 210 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 PIP4P2Q8N4L2 257 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 MAPK1IP1LQ8NDC0 245 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 SCGB1C1Q8TD33 95 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 RNF5Q99942 180 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 MANBALQ9NQG1 85 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.24□□□□□ -0.77
DDX39A-202ENST00000324340 TMEM140Q9NV12 185 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 BET1LQ9NYM9 111 aa10.24□□□□□ -0.77
DDX39A-202ENST00000324340 A0A1B0GV50 99 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 A0A1W2PRD5 423 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 A0A1W2PRF3 423 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 A0A1W2PRM7 423 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 C20orf202A1L168 122 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 TIMM23O14925 209 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 TOMM40O96008 361 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 IGLV2-23P01705 113 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 PPBPP02775 128 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 OR9G9P0C7N8 305 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 SAA4P35542 130 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 LGALS7P47929 136 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 RPL15P61313 204 aaKnown RBP10.23□□□□□ -0.77
DDX39A-202ENST00000324340 RPL23P62829 140 aaKnown RBP10.23□□□□□ -0.77
DDX39A-202ENST00000324340 RELBQ01201 579 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 PDLIM3Q53GG5 364 aaPredicted RBP10.23□□□□□ -0.77
DDX39A-202ENST00000324340 TMEM41BQ5BJD5 291 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 CXorf66Q5JRM2 361 aaPredicted RBP10.23□□□□□ -0.77
DDX39A-202ENST00000324340 OR4A47Q6IF82 309 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 VKORC1L1Q8N0U8 176 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 HARBI1Q96MB7 349 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 MAGT1Q9H0U3 335 aa10.23□□□□□ -0.77
DDX39A-202ENST00000324340 HSPB7Q9UBY9 170 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms