RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 NNATQ16517 81 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 LINC01545Q5VT33 79 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 LYSMD4Q5XG99 296 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 PCSK4Q6UW60 755 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 GGNQ86UU5 652 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 MED12LQ86YW9 2145 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 MKXQ8IYA7 352 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 MCRIP2Q9BUT9 160 aaKnown RBP5.46□□□□□ -1.54
ZNF540-201ENST00000316433 COL25A1Q9BXS0 654 aaPredicted RBP5.46□□□□□ -1.54
ZNF540-201ENST00000316433 OR2H1Q9GZK4 316 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM126AQ9H061 195 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 UBTD1Q9HAC8 227 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 IGKV1-12A0A0C4DH73 117 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 RHODO00212 210 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 FCN3O75636 299 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 IGKV1D-12P01611 117 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 DEFA4P12838 97 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 WIPI1Q5MNZ9 446 aaPredicted RBP5.46□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM78Q5T7P6 136 aa5.46□□□□□ -1.54
ZNF540-201ENST00000316433 WIPF2Q8TF74 440 aaPredicted RBP5.46□□□□□ -1.54
ZNF540-201ENST00000316433 TRBV20-1A0A075B6N2 111 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 A0A0G2JRQ6 117 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM213A2RRL7 107 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 IZUMO1RA6ND01 250 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM8BA6NDV4 472 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 E9PLD3 99 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 NTN3O00634 580 aaPredicted RBP5.45□□□□□ -1.54
ZNF540-201ENST00000316433 MPDU1O75352 247 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 COX6A1P12074 109 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 ERVK11-1P61568 191 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 PSG5Q15238 335 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM30BQ3MIR4 351 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 RASL11AQ6T310 242 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 CHCHD1Q96BP2 118 aaKnown RBP5.45□□□□□ -1.54
ZNF540-201ENST00000316433 ADTRPQ96IZ2 230 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 DNAJC30Q96LL9 226 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 LIN7CQ9NUP9 197 aaKnown RBP5.45□□□□□ -1.54
ZNF540-201ENST00000316433 SMIM27A0A1W2PRY6 76 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 OR5AL1P0C617 328 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 C3AR1Q16581 482 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 SPANXN5Q5MJ07 72 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 MOGAT3Q86VF5 341 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 ZDHHC23Q8IYP9 409 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 MAP1LC3AQ9H492 121 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 OSTCQ9NRP0 149 aa5.45□□□□□ -1.54
ZNF540-201ENST00000316433 NCOA6Q14686 2063 aaPredicted RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 OR2J3O76001 311 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 AREGP15514 252 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 GLRXP35754 106 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 RPL31P62899 125 aaKnown RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 FXYD3Q14802 87 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 MEIG1Q5JSS6 88 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 FAM159AQ6UWV7 190 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM178AQ8NBL3 297 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 PHLDA1Q8WV24 401 aaPredicted RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 BORCS8Q96FH0 119 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 RAB9BQ9NP90 201 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 MRPS17Q9Y2R5 130 aaKnown RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 INSIG2Q9Y5U4 225 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 GON4LQ3T8J9 2241 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 ARID1BQ8NFD5 2236 aaPredicted RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 EPOPA6NHQ4 379 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 PMS2P5A8MQ11 134 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 LINC01565O15544 149 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 CLDN14O95500 239 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 SLC25A5P05141 298 aaKnown RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 PPIFP30405 207 aaKnown RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 C8orf46Q8TAG6 207 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 C11orf52Q96A22 123 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 GPHA2Q96T91 129 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 TMEM147Q9BVK8 224 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 RNASE7Q9H1E1 156 aaKnown RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 SOX21Q9Y651 276 aaPredicted RBP5.44□□□□□ -1.54
ZNF540-201ENST00000316433 PCSK5Q92824 1860 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 TRAV5A0A0B4J249 113 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 K7ERJ3 54 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 IGLV2-14P01704 120 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 IFITM1P13164 125 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 OPRK1P41145 380 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 POU2AF1Q16633 256 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 RTL8BQ17RB0 113 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 C3orf36Q3SXR2 165 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 TTC32Q5I0X7 151 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 ZNF818PQ6ZRF7 136 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 FAM90A1Q86YD7 464 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 OR5AN1Q8NGI8 311 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 IL1F10Q8WWZ1 152 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 KIR2DL4Q99706 377 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 PIMREGQ9BSJ6 248 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 SLC25A33Q9BSK2 321 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 NPCDR1Q9BY65 106 aa5.44□□□□□ -1.54
ZNF540-201ENST00000316433 ALPK2Q86TB3 2170 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 PTPRBP23467 1997 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 PGLYRP1O75594 196 aaPredicted RBP5.43□□□□□ -1.54
ZNF540-201ENST00000316433 GCSHP23434 173 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 FXYD2P54710 66 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 TFF3Q07654 80 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 GAGE2BQ13066 116 aa5.43□□□□□ -1.54
ZNF540-201ENST00000316433 GAGE2EQ4V326 116 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms