RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 BSCL2Q96G97 398 aaPredicted RBP17.14■□□□□ 0.33
HOXD4-201ENST00000306324 RAB40CQ96S21 281 aa17.14■□□□□ 0.33
HOXD4-201ENST00000306324 F8W735 103 aaPredicted RBP17.13■□□□□ 0.33
HOXD4-201ENST00000306324 K7EPK0 472 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 TMEM50AO95807 157 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 IGLL1P15814 213 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 SYNJ2BPP57105 145 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 SMIM8Q96KF7 97 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 OR4C12Q96R67 309 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 ATP6V0BQ99437 205 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 TXN2Q99757 166 aa17.13■□□□□ 0.33
HOXD4-201ENST00000306324 GAR1Q9NY12 217 aaKnown RBP17.13■□□□□ 0.33
HOXD4-201ENST00000306324 STRAPQ9Y3F4 350 aaKnown RBP17.13■□□□□ 0.33
HOXD4-201ENST00000306324 GNG7O60262 68 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 NPBWR1P48145 328 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 H2BFSP57053 126 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 IL15RAQ13261 267 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 RAB32Q13637 225 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 KLF5Q13887 457 aaPredicted RBP17.12■□□□□ 0.33
HOXD4-201ENST00000306324 RCC1LQ96I51 464 aaKnown RBP17.12■□□□□ 0.33
HOXD4-201ENST00000306324 MED28Q9H204 178 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 NBEAL1Q6ZS30 2694 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 IGHV3-35A0A0C4DH35 117 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 L7N2F9 121 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 PAX9P55771 341 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 VAMP2P63027 116 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 ETFRF1Q6IPR1 90 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 SPSB3Q6PJ21 355 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 CHRDL1Q9BU40 450 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 NMES1Q9C002 83 aa17.12■□□□□ 0.33
HOXD4-201ENST00000306324 MRPL36Q9P0J6 103 aaKnown RBP17.12■□□□□ 0.33
HOXD4-201ENST00000306324 NUPL2O15504 423 aaKnown RBP17.11■□□□□ 0.33
HOXD4-201ENST00000306324 FCGR2BP31994 310 aaPredicted RBP17.11■□□□□ 0.33
HOXD4-201ENST00000306324 CYCSP99999 105 aaKnown RBP17.11■□□□□ 0.33
HOXD4-201ENST00000306324 CD69Q07108 199 aa17.11■□□□□ 0.33
HOXD4-201ENST00000306324 C1QL4Q86Z23 238 aa17.11■□□□□ 0.33
HOXD4-201ENST00000306324 MCRIP2Q9BUT9 160 aaKnown RBP17.11■□□□□ 0.33
HOXD4-201ENST00000306324 CTSGP08311 255 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 SLC25A4P12235 298 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 TAS2R30P59541 319 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 LRRC37A5PQ49AS3 106 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 PRSS54Q6PEW0 395 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 SLC16A13Q7RTY0 426 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 OR4X1Q8NH49 305 aa17.1■□□□□ 0.33
HOXD4-201ENST00000306324 SEC14L6B5MCN3 397 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 TSC22D2O75157 780 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 PVALBP20472 110 aaPredicted RBP17.09■□□□□ 0.33
HOXD4-201ENST00000306324 ADMP35318 185 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 RND2P52198 227 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 FCN2Q15485 313 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 FAM106AQ4KMX7 169 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 OXLD1Q5BKU9 147 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 WDR89Q96FK6 387 aaPredicted RBP17.09■□□□□ 0.33
HOXD4-201ENST00000306324 ACY3Q96HD9 319 aa17.09■□□□□ 0.33
HOXD4-201ENST00000306324 NOTCH1P46531 2555 aa17.08■□□□□ 0.33
HOXD4-201ENST00000306324 ZNF320A2RRD8 509 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 CLN5O75503 358 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 CXCL3P19876 107 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 BCAP31P51572 246 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 GPHB5Q86YW7 130 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 OR9G4Q8NGQ1 327 aa17.08■□□□□ 0.32
HOXD4-201ENST00000306324 METTL15P1P0C7V9 234 aa17.07■□□□□ 0.32
HOXD4-201ENST00000306324 GPX4P36969 197 aaPredicted RBP17.07■□□□□ 0.32
HOXD4-201ENST00000306324 OR8G2PQ6IF36 304 aa17.07■□□□□ 0.32
HOXD4-201ENST00000306324 OR11H7Q8NGC8 314 aa17.07■□□□□ 0.32
HOXD4-201ENST00000306324 SLC35E1Q96K37 410 aa17.07■□□□□ 0.32
HOXD4-201ENST00000306324 G3V4G9 280 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 CAV2P51636 162 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 TMEM14EPQ6UXP3 125 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 TMEM116Q8NCL8 245 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 PPP1R1CQ8WVI7 109 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 CACNG8Q8WXS5 425 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 NPIPB3Q92617 1050 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 ELOVL1Q9BW60 279 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 PEMTQ9UBM1 199 aa17.06■□□□□ 0.32
HOXD4-201ENST00000306324 SAP30O75446 220 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 SCGB2A1O75556 95 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 CCNKO75909 580 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 RLN2P04090 185 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 RRAS2P62070 204 aaPredicted RBP17.05■□□□□ 0.32
HOXD4-201ENST00000306324 RELQ04864 619 aaPredicted RBP17.05■□□□□ 0.32
HOXD4-201ENST00000306324 C9orf66Q5T8R8 295 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 C11orf1Q9H5F2 150 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 PRSS46E5RG02 174 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 DEDDO75618 318 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 GAMTQ14353 236 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 UNQ9165/PRO28630Q6UXU0 137 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 GPR61Q9BZJ8 451 aa17.05■□□□□ 0.32
HOXD4-201ENST00000306324 ZNF436Q9C0F3 470 aaPredicted RBP17.05■□□□□ 0.32
HOXD4-201ENST00000306324 TRAV30A0A087WSZ9 112 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 FAM24AA6NFZ4 105 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 LGALS9O00182 355 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 NDUFA4O00483 81 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 YIF1AO95070 293 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 OR10J1P30954 320 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 SAMD5Q5TGI4 173 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 ACOT7LQ6ZUV0 252 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 REC114Q7Z4M0 266 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 OR10P1Q8NGE3 313 aa17.04■□□□□ 0.32
HOXD4-201ENST00000306324 C20orf24Q9BUV8 137 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms