RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 PRSS53Q2L4Q9 553 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 SLC23A3Q6PIS1 610 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 WDR82Q6UXN9 313 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ACP7Q6ZNF0 438 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 FGFRL1Q8N441 504 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 RBM3P98179 157 aaKnown RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 FAM78AQ5JUQ0 283 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 MSRB3Q8IXL7 192 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF683Q8IZ20 524 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 VSIG2Q96IQ7 327 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 TMUB1Q9BVT8 246 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ICAM4Q14773 271 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 GVQW1Q8N7I0 195 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ZDHHC16Q969W1 377 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 MESP1Q9BRJ9 268 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 EMC6Q9BV81 110 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 SMAD7O15105 426 aaKnown RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ATP5EP2Q5VTU8 51 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 THSD4Q6ZMP0 1018 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 F2RL2O00254 374 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 NDUFB1O75438 58 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 TOMM40O96008 361 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 IGHMP01871 453 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 PSG1P11464 419 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 IL15RAQ13261 267 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 PRDM14Q9GZV8 571 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 KCNE3Q9Y6H6 103 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 PAPPA2Q9BXP8 1791 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 FABP5P3A8MUU1 101 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 NPIPB11E5RHQ5 1161 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 MGST3O14880 152 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 NPFFO15130 113 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 IGFBPL1Q8WX77 278 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 TMPRSS2O15393 492 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 LEPP41159 167 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 MRPL23Q16540 153 aaKnown RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF750Q32MQ0 723 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 DMBT1Q9UGM3 2413 aaPredicted RBP4.12□□□□□ -1.75
CSMD3-201ENST00000297405 TAX1BP3O14907 124 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 C8orf46Q8TAG6 207 aa4.12□□□□□ -1.75
CSMD3-201ENST00000297405 UQCRQO14949 82 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 KIR2DL5BA0A0G2JN68 375 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 KIR2DL5BA0A0G2JPC4 375 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MYMXA0A1B0GTQ4 84 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 GUSBP1Q15486 140 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 KIR2DL5AQ8N109 375 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 LMO7DNF2Z398 122 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 SLC37A2Q8TED4 501 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 Q96M66 194 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 VKORC1Q9BQB6 163 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 PRO1854Q9UHT4 67 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 EDIL3O43854 480 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 IGHV2-5P01817 119 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MYOD1P15172 320 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TRAV13-2A0A0B4J235 113 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 CEACAM4O75871 244 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 RNASE1P07998 156 aaKnown RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 GNB2P62879 340 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MRPS36P82909 103 aaKnown RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TMEM219Q86XT9 240 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 GPBAR1Q8TDU6 330 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 CNRIP1Q96F85 164 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 KCNK17Q96T54 332 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 NABP2Q9BQ15 211 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 CR1P17927 2039 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 Q71RC1 249 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 ATG4DQ86TL0 474 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 ABHD12Q8N2K0 398 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TNFSF14O43557 240 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TBX6O95947 436 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 RPL27AP46776 148 aaKnown RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 DSCR8Q96T75 97 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 ZNHIT1O43257 154 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 FOXG1P55316 489 aaPredicted RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 C9orf50Q5SZB4 431 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TEX43Q6ZNM6 134 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 SRSF8Q9BRL6 282 aaKnown RBP4.11□□□□□ -1.75
CSMD3-201ENST00000297405 CFPP27918 469 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 ZNF664Q8N3J9 261 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 JPT1Q9UK76 154 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MUC21A0A0G2JKD1 596 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MUC21A0A140T8X8 626 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 KLF4O43474 513 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TMEM187Q14656 261 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 MUC21Q5SSG8 566 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 PCOLCE2Q9UKZ9 415 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 IGHV2-26A0A0B4J1V2 119 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 hADV29S1A0JD25 119 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 SOCS1O15524 211 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 TCRAP04437 139 aa4.11□□□□□ -1.75
CSMD3-201ENST00000297405 ID4P47928 161 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 SPRYD7Q5W111 196 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 PGPA6NDG6 321 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 MPV17L2Q567V2 206 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 TM4SF19Q96DZ7 209 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 VSTM2LQ96N03 204 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 ANKRD34AQ69YU3 496 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 NUDT8Q8WV74 236 aa4.1□□□□□ -1.75
CSMD3-201ENST00000297405 RNF39Q9H2S5 420 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms