RNA–Protein interactions for RNA: ENST00000616407.1

PPP4R3B-206, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-206ENST00000616407 PGPEP1LA6NFU8 196 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 IGKV1-16P04430 117 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 COMPP49747 757 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 EFNB3Q15768 340 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 MRPL32Q9BYC8 188 aaKnown RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 A0A1B0GW64 132 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 E7EQL1 145 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 CDX1P47902 265 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 RPL29P47914 159 aaKnown RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 KHDC1LQ5JSQ8 128 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 PRNTQ86SH4 94 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR2D3Q8NGH3 330 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 NEU4Q8WWR8 484 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 FOXA2Q9Y261 457 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 IGKV1D-33P01593 117 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 IGKV1-33P01594 117 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 FCGR2BP31994 310 aaPredicted RBP10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 LCN2P80188 198 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 CD69Q07108 199 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 COX19Q49B96 90 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 OR4A5Q8NH83 315 aa10.84□□□□□ -0.67
PPP4R3B-206ENST00000616407 IGHV3-35A0A0C4DH35 117 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 BET1LQ9NYM9 111 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGLV3-9A0A075B6K5 115 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 SLC17A3O00476 420 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 LY6HO94772 140 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 SLC25A48Q6ZT89 311 aaKnown RBP10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 BPIFA4PQ86YQ2 179 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 C15orf65H3BRN8 121 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 CEACAM4O75871 244 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 CFHR2P36980 270 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 GATA4P43694 442 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 ELOBQ15370 118 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 RNASEH2CQ8TDP1 164 aaKnown RBP10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 MSRB2Q9Y3D2 182 aa10.83□□□□□ -0.68
PPP4R3B-206ENST00000616407 TRAV34A0A0B4J273 112 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGHV1-8P0DP01 117 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 FAM162BQ5T6X4 162 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 UNQ5815/PRO19632Q6UWF5 114 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 CBLN4Q9NTU7 201 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 PTPRQQ9UMZ3 2332 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 C1QTNF9P0C862 333 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 CCKARP32238 428 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 ZNF134P52741 427 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 PPP1R27Q86WC6 154 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 OR1P1Q8NH06 330 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 ZNF257Q9Y2Q1 563 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 CLEC2AQ6UVW9 174 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 MGST2Q99735 147 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 MED12LQ86YW9 2145 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGF2RP11717 2491 aa10.82□□□□□ -0.68
PPP4R3B-206ENST00000616407 TMSB15BA0A087X1C1 80 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 GOSR1O95249 250 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 MFAP4P55083 255 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 TLN1Q9Y490 2541 aaKnown RBP10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGHV3OR16-10A0A075B7F0 116 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 NBEAP1P0C6P0 100 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 GPX4P36969 197 aaPredicted RBP10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SPATA31B1PQ5VZV4 182 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 AP1S3Q96PC3 154 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SLC25A33Q9BSK2 321 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SEPSECSQ9HD40 501 aaKnown RBP10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 CACNA1AO00555 2505 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 CSN3P07498 182 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 ZNF137PP52743 207 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 C17orf58Q2M2W7 97 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 KIAA1644Q3SXP7 199 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SPRNQ5BIV9 151 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SEM1Q6ZVN7 128 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 EAF1Q96JC9 268 aaPredicted RBP10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 APCSP02743 223 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 COL8A2P25067 703 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 SRSF12Q8WXF0 261 aaKnown RBP10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 VAMP8Q9BV40 100 aa10.81□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGKV3-7A0A075B6H7 116 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 MMP23AO75900 390 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 IL4P05112 153 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 CXCL1P09341 107 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 STAG3L2P0CL84 134 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 STAG3L3P0CL85 134 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 MLANAQ16655 118 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 C3orf36Q3SXR2 165 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 MRPL18Q9H0U6 180 aaKnown RBP10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 UNC80Q8N2C7 3258 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGHV2-26A0A0B4J1V2 119 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 H0YJW9 148 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 WNT2P09544 360 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 CBLN1P23435 193 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 IGF2-ASQ6U949 168 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 HAPLN4Q86UW8 402 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 CEP295Q9C0D2 2601 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 FAM208BQ5VWN6 2430 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 A8MWL6 223 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 CA7P43166 264 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 ELOVL1Q9BW60 279 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 WNT10AQ9GZT5 417 aa10.8□□□□□ -0.68
PPP4R3B-206ENST00000616407 GRIFINA4D1Z8 144 aa10.79□□□□□ -0.68
PPP4R3B-206ENST00000616407 TIMM23O14925 209 aa10.79□□□□□ -0.68
PPP4R3B-206ENST00000616407 Q6ZPA2 131 aa10.79□□□□□ -0.68
PPP4R3B-206ENST00000616407 ATP5J2P56134 94 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms