RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 IAPPP10997 89 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 SNCAP37840 140 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 H2BFSP57053 126 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 KPRPQ5T749 579 aaPredicted RBP14.57□□□□□ -0.08
CCDC9-205ENST00000600117 SLC25A24Q6NUK1 477 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 KLHL30-AS1Q8NEE0 82 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 C4orf3Q8WVX3 66 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 HIPK2Q9H2X6 1198 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 MGAT4CQ9UBM8 478 aa14.57□□□□□ -0.08
CCDC9-205ENST00000600117 RCL1Q9Y2P8 373 aaKnown RBP14.57□□□□□ -0.08
CCDC9-205ENST00000600117 I3L521 148 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 SCGB1D2O95969 90 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 LGALS1P09382 135 aaKnown RBP14.56□□□□□ -0.08
CCDC9-205ENST00000600117 HTR2BP41595 481 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 RUNX1Q01196 453 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 ATP5G2Q06055 141 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 FCN2Q15485 313 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 C15orf32Q32M92 178 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 C2orf83Q53S99 150 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 C8orf86Q6ZUL3 223 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 REC114Q7Z4M0 266 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 SLC24A4Q8NFF2 622 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 WDR89Q96FK6 387 aaPredicted RBP14.56□□□□□ -0.08
CCDC9-205ENST00000600117 OR5B12Q96R08 314 aa14.56□□□□□ -0.08
CCDC9-205ENST00000600117 MFSD2BA6NFX1 497 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 NUDT19A8MXV4 375 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 G3V4G9 280 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 K7EIM0 57 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 WRBO00258 174 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 CYB5BO43169 146 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 TMEM50AO95807 157 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 CXCL3P19876 107 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 NPY1RP25929 384 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 ZNF343Q6P1L6 599 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 MED28Q9H204 178 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 C11orf1Q9H5F2 150 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 THYN1Q9P016 225 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 U3KQ87 197 aa14.55□□□□□ -0.08
CCDC9-205ENST00000600117 C15orf62A8K5M9 175 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 I3L2K1 104 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 SSSCA1O60232 199 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 SUB1P53999 127 aaKnown RBP eCLIP14.54□□□□□ -0.08
CCDC9-205ENST00000600117 PAX9P55771 341 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 EXOSC2Q13868 293 aaKnown RBP14.54□□□□□ -0.08
CCDC9-205ENST00000600117 DEFB136Q30KP8 78 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 ETV3LQ6ZN32 361 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 OR11H7Q8NGC8 314 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 MISP3Q96FF7 219 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 CIB3Q96Q77 187 aaPredicted RBP14.54□□□□□ -0.08
CCDC9-205ENST00000600117 NMES1Q9C002 83 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 S4R3C0 116 aa14.54□□□□□ -0.08
CCDC9-205ENST00000600117 K7EPK0 472 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 LY86O95711 162 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 IFNA10P01566 189 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 RRAS2P62070 204 aaPredicted RBP14.53□□□□□ -0.08
CCDC9-205ENST00000600117 RAB32Q13637 225 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 VN1R17PQ8TDU5 208 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 RAX2Q96IS3 184 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 SMIM8Q96KF7 97 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 CCDC140Q96MF4 163 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 OR4C12Q96R67 309 aa14.53□□□□□ -0.08
CCDC9-205ENST00000600117 IGHV3-21A0A0B4J1V1 117 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 MT-CO2P00403 227 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 TRBV12-3P01733 135 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 PRB2P02812 416 aaPredicted RBP14.52□□□□□ -0.09
CCDC9-205ENST00000600117 ATP5IP56385 69 aaPredicted RBP14.52□□□□□ -0.09
CCDC9-205ENST00000600117 CYCSP99999 105 aaKnown RBP14.52□□□□□ -0.09
CCDC9-205ENST00000600117 SAMD5Q5TGI4 173 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 Q6ZNX1 250 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 ZNF502Q8TBZ5 544 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 SCARB1Q8WTV0 552 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 EEF1AKMT3Q96AZ1 226 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 CXorf58Q96LI9 332 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 DUX3Q96PT4 197 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 RAB40CQ96S21 281 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 FNDC4Q9H6D8 234 aaPredicted RBP14.52□□□□□ -0.09
CCDC9-205ENST00000600117 LSM5Q9Y4Y9 91 aaKnown RBP14.52□□□□□ -0.09
CCDC9-205ENST00000600117 DNAH9Q9NYC9 4486 aa14.52□□□□□ -0.09
CCDC9-205ENST00000600117 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.51□□□□□ -0.09
CCDC9-205ENST00000600117 CORTO00230 105 aa14.51□□□□□ -0.09
CCDC9-205ENST00000600117 IGHV3-23P01764 117 aa14.51□□□□□ -0.09
CCDC9-205ENST00000600117 TAS2R30P59541 319 aa14.51□□□□□ -0.09
CCDC9-205ENST00000600117 RNASEH2CQ8TDP1 164 aaKnown RBP14.51□□□□□ -0.09
CCDC9-205ENST00000600117 PSENENQ9NZ42 101 aa14.51□□□□□ -0.09
CCDC9-205ENST00000600117 IGHV4OR15-8A0A075B7B6 117 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 A0A087WW49 117 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 TRBV7-1A0A0A6YYK4 115 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 ANKRD34BA5PLL1 514 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 F8W735 103 aaPredicted RBP14.5□□□□□ -0.09
CCDC9-205ENST00000600117 H3BP45 60 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 CCL24O00175 119 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 S100A10P60903 97 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 FHL3Q13643 280 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 NOXA1Q86UR1 476 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 OR4F17Q8NGA8 305 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 PINX1Q96BK5 328 aaKnown RBP14.5□□□□□ -0.09
CCDC9-205ENST00000600117 OR4F4Q96R69 305 aa14.5□□□□□ -0.09
CCDC9-205ENST00000600117 PEF1Q9UBV8 284 aaKnown RBP14.5□□□□□ -0.09
CCDC9-205ENST00000600117 IGHV3-48P01763 117 aa14.49□□□□□ -0.09
CCDC9-205ENST00000600117 HSPB1P04792 205 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms