RNA–Protein interactions for RNA: ENST00000599716.5

SHKBP1-220, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-220ENST00000599716 ZBTB34Q8NCN2 500 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 SRSF8Q9BRL6 282 aaKnown RBP6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 AIFM2Q9BRQ8 373 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 ZNF2Q9BSG1 426 aaPredicted RBP6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 MFFQ9GZY8 342 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 MS4A6AQ9H2W1 248 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 EHFQ9NZC4 300 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 COMMD9Q9P000 198 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 CELA1Q9UNI1 258 aa6.27□□□□□ -1.41
SHKBP1-220ENST00000599716 IGHV4-4A0A075B6R2 117 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 ELOA3CA0A087WX78 387 aaPredicted RBP6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 TRAV14DV4A0A0A6YYC5 116 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 LOC100506127A0A0U1RQW1 187 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 CYB5BO43169 146 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 IGKV1-39P01597 117 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 IGKV1D-39P04432 117 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 F2RP25116 425 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 HSPA13P48723 471 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 MSMO1Q15800 293 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 GSG1LQ6UXU4 331 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 SPARTQ8N0X7 666 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 OR5AP2Q8NGF4 316 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 DGCR14Q96DF8 476 aaKnown RBP6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 OR10C1Q96KK4 312 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 NXF2Q9GZY0 626 aaKnown RBP6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 MRPL36Q9P0J6 103 aaKnown RBP6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 RABAC1Q9UI14 185 aa6.26□□□□□ -1.41
SHKBP1-220ENST00000599716 A0A1B0GU03 582 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 C15orf61A6NNL5 157 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 DNASE2O00115 360 aaPredicted RBP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 RTL8CO15255 209 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 MRPS14O60783 128 aaKnown RBP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 SNAPC5O75971 98 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 ZNF688P0C7X2 276 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 FGF9P31371 208 aaPredicted RBP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 PPP5CP53041 499 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 MFAP4P55083 255 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 RELQ04864 619 aaPredicted RBP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 UBE2UQ5VVX9 321 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 THOC7Q6I9Y2 204 aaKnown RBP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 STHQ8IWL8 128 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 STXBP6Q8NFX7 210 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 TSPAN14Q8NG11 270 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 OR1P1Q8NH06 330 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 CMTM3Q96MX0 182 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 IFT46Q9NQC8 304 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 TMEM14BQ9NUH8 114 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 SSR3Q9UNL2 185 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 PUS1Q9Y606 427 aaKnown RBP eCLIP6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 X6R8D5 127 aa6.25□□□□□ -1.41
SHKBP1-220ENST00000599716 IGLV2-18A0A075B6J9 118 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 GNG7O60262 68 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 SCGNO76038 276 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 HLA-DMAP28067 261 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 MLANAQ16655 118 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 HSD17B13Q7Z5P4 300 aaPredicted RBP6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 TPRA1Q86W33 373 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 MAPKAPK5-AS1Q8N8E1 139 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 MRGPRFQ96AM1 343 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 MOB3AQ96BX8 217 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 TMEM56Q96MV1 263 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 VSIRQ9H7M9 311 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 ZFAND3Q9H8U3 227 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 PRNDQ9UKY0 176 aa6.24□□□□□ -1.41
SHKBP1-220ENST00000599716 PRSS29PA6NIE9 313 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 GPR31O00270 319 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 EIF4EP06730 217 aaKnown RBP6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 DEFB1P60022 68 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 PAFAH1B2P68402 229 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 C12orf74Q32Q52 190 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 ACTL10Q5JWF8 245 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 DHRS11Q6UWP2 260 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 TRPT1Q86TN4 253 aaKnown RBP6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 TBC1D26Q86UD7 250 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 ZNF575Q86XF7 245 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 OR5H2Q8NGV7 314 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 OR4A16Q8NH70 328 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 SEC22AQ96IW7 307 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 DIABLOQ9NR28 239 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 BLOC1S6Q9UL45 172 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
SHKBP1-220ENST00000599716 DEFB131BA0A096LNP1 70 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 TRAV10A0A0B4J240 114 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 ERICH4A6NGS2 130 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 K7EQG2 157 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 FGF2P09038 288 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 PI3P19957 117 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 HRH1P35367 487 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 TAS2R20P59543 309 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 GABARAPL2P60520 117 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 PRCDQ00LT1 54 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 H2BFWTQ7Z2G1 175 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 LYSMD2Q8IV50 215 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 ATP6V0BQ99437 205 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 GINS3Q9BRX5 216 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 FAT1Q14517 4588 aa6.22□□□□□ -1.41
SHKBP1-220ENST00000599716 ZNF705EA8MWA4 302 aaPredicted RBP6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 C11orf94C9JXX5 98 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 TMEM50AO95807 157 aa6.21□□□□□ -1.42
SHKBP1-220ENST00000599716 IGKV1-5P01602 117 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms