RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 RND3P61587 244 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 PRR31Q5SQ13 230 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 C8orf82Q6P1X6 216 aaPredicted RBP9.35□□□□□ -0.91
SEH1L-208ENST00000590843 DPPA3Q6W0C5 159 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 PLPPR1Q8TBJ4 325 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 RAB24Q969Q5 203 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 HS3ST6Q96QI5 342 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 GREB1Q4ZG55 1949 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 CACNA1AO00555 2505 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 A0A1B0GTI1 187 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 ZNF705FA8MVS1 300 aaPredicted RBP9.35□□□□□ -0.91
SEH1L-208ENST00000590843 TCAPO15273 167 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 IGHV4-59P01825 116 aa9.35□□□□□ -0.91
SEH1L-208ENST00000590843 ZNF705DP0CH99 300 aaPredicted RBP9.35□□□□□ -0.91
SEH1L-208ENST00000590843 ZNF705BP0CI00 300 aaPredicted RBP9.35□□□□□ -0.91
SEH1L-208ENST00000590843 RCC2Q9P258 522 aaKnown RBP9.35□□□□□ -0.91
SEH1L-208ENST00000590843 TRAV21A0A0B4J279 112 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 HLA-DRB1P01911 266 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 C11orf87Q6NUJ2 197 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 STPG2Q8N412 459 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 IGHV3-66A0A0C4DH42 116 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 FOXI3A8MTJ6 420 aaPredicted RBP9.34□□□□□ -0.91
SEH1L-208ENST00000590843 A8MWL6 223 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 OR2C1O95371 312 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 CGAP01215 116 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 PMS2P11Q13670 270 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 TGFBR1P36897 503 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 RAB32Q13637 225 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 OR2D3Q8NGH3 330 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 A0A1W2PNU3 283 aaPredicted RBP9.34□□□□□ -0.91
SEH1L-208ENST00000590843 G3V3Q6 166 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 ZNF688P0C7X2 276 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 FAM74A4Q5TZK3 123 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 MORN3Q6PF18 240 aaPredicted RBP9.34□□□□□ -0.91
SEH1L-208ENST00000590843 NOL4LQ96MY1 436 aaPredicted RBP9.34□□□□□ -0.91
SEH1L-208ENST00000590843 PROK2Q9HC23 129 aa9.34□□□□□ -0.91
SEH1L-208ENST00000590843 MFNGO00587 321 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 PTHLHP12272 177 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 CADM3Q8N126 398 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 TMEM89A2RUT3 159 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 F5H768 121 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 ASCL2Q99929 193 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 SEC11CQ9BY50 192 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 SIGLEC9Q9Y336 463 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 HIST1H3AP68431 136 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 LYZL2Q7Z4W2 148 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 CD177Q8N6Q3 437 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 SMIM8Q96KF7 97 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 MRPS16Q9Y3D3 137 aaKnown RBP9.33□□□□□ -0.92
SEH1L-208ENST00000590843 TRBV6-7A0A0A0MS04 114 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 CCL18P55774 89 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 MYOZ3Q8TDC0 251 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 C2CD4CQ8TF44 421 aa9.33□□□□□ -0.92
SEH1L-208ENST00000590843 LOC102724200A0A096LPH7 203 aaPredicted RBP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 SOSTQ9BQB4 213 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 CCDC88CQ9P219 2028 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 A0A1W2PP11 408 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 BCL2L11O43521 198 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 CA1P00915 261 aaPredicted RBP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 CGB3P0DN86 165 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 PRB3Q04118 309 aaPredicted RBP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 OR10J3Q5JRS4 329 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 GPR146Q96CH1 333 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 RHPN1-AS1Q9BWJ2 59 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 CBY1Q9Y3M2 126 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 RNASE4P34096 147 aaKnown RBP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 TWIST1Q15672 202 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 HIST3H3Q16695 136 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 TMEM97Q5BJF2 176 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 ACTL10Q5JWF8 245 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 FAM90A2PQ658T7 463 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 RNF144BQ7Z419 303 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 CRXO43186 299 aaPredicted RBP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 VENTXO95231 258 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 TMEM255AQ5JRV8 349 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 PLAC9Q5JTB6 97 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 VKORC1L1Q8N0U8 176 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 OR4C5Q8NGB2 326 aa9.32□□□□□ -0.92
SEH1L-208ENST00000590843 TAF15Q92804 592 aaKnown RBP eCLIP9.32□□□□□ -0.92
SEH1L-208ENST00000590843 MLNRO43193 412 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 NDUFS7O75251 213 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 LGALS1P09382 135 aaKnown RBP9.31□□□□□ -0.92
SEH1L-208ENST00000590843 IGHV4-31P0DP07 118 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 FAM219BQ5XKK7 198 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 S4R3C0 116 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 SHISA3A0PJX4 238 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 FABP9Q0Z7S8 132 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 TEX261Q6UWH6 196 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 LINC00311Q8N616 119 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 GEMIN7Q9H840 131 aaKnown RBP9.31□□□□□ -0.92
SEH1L-208ENST00000590843 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.31□□□□□ -0.92
SEH1L-208ENST00000590843 C11orf94C9JXX5 98 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 MPZP25189 248 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 SRIP30626 198 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 SUMO1P63165 101 aaKnown RBP9.31□□□□□ -0.92
SEH1L-208ENST00000590843 LINC00305Q7Z4B0 112 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 USF3Q68DE3 2245 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 DNAJC9-AS1A6NH13 148 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 LYPD3O95274 346 aa9.31□□□□□ -0.92
SEH1L-208ENST00000590843 GHRHP01286 108 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms