RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 OPRK1P41145 380 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 ELLP55199 621 aaPredicted RBP7.51□□□□□ -1.21
VPS25-205ENST00000590339 CCL20P78556 96 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 SSBP2P81877 361 aaPredicted RBP7.51□□□□□ -1.21
VPS25-205ENST00000590339 WT1-ASQ06250 92 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 PMS2P11Q13670 270 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 ZNF506Q5JVG8 444 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 LHFPL4Q7Z7J7 247 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 RPP25LQ8N5L8 163 aaKnown RBP7.51□□□□□ -1.21
VPS25-205ENST00000590339 Q8N6K4 173 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 OR10W1Q8NGF6 305 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 NARS2Q96I59 477 aaKnown RBP7.51□□□□□ -1.21
VPS25-205ENST00000590339 MGST2Q99735 147 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 PBDC1Q9BVG4 233 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 SMDT1Q9H4I9 107 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 KCNIP2Q9NS61 270 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 SIGLEC9Q9Y336 463 aa7.51□□□□□ -1.21
VPS25-205ENST00000590339 TBL2Q9Y4P3 447 aaKnown RBP7.51□□□□□ -1.21
VPS25-205ENST00000590339 DNHD1Q96M86 4753 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 TRAV20A0A0B4J274 112 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 CTXND1A0A1B0GTU2 59 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 MAP1LC3B2A6NCE7 125 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 TCF21O43680 179 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 SCO1O75880 301 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 AVPP01185 164 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 APOC3P02656 99 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 OPN1MWP04001 364 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 SFTA3P0C7M3 94 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 OPN1MW2P0DN77 364 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 OPN1MW3P0DN78 364 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 RPL27AP46776 148 aaKnown RBP7.5□□□□□ -1.21
VPS25-205ENST00000590339 COMPP49747 757 aaPredicted RBP7.5□□□□□ -1.21
VPS25-205ENST00000590339 CD69Q07108 199 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 EBI3Q14213 229 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 PEA15Q15121 130 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 FFAR4Q5NUL3 377 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 DYNAPQ8N1N2 210 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 ZNF709Q8N972 641 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 NPBQ8NG41 125 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 SFT2D1Q8WV19 159 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 AJUBAQ96IF1 538 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 C19orf24Q9BVV8 132 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 MAP1LC3BQ9GZQ8 125 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 NPVFQ9HCQ7 196 aa7.5□□□□□ -1.21
VPS25-205ENST00000590339 FBN1P35555 2871 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 LOC102723971A0A1B0GUV8 181 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 SMCO3A2RU48 225 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 RBFOX3A6NFN3 312 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 TEX22C9J3V5 150 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 F8W036 122 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 TOX4O94842 621 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 YIF1AO95070 293 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 M6PRP20645 277 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 GPX4P36969 197 aaPredicted RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 UBE2E1P51965 193 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 ERHP84090 104 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 ICAM4Q14773 271 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 GUCA2BQ16661 112 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 ACOT6Q3I5F7 207 aaPredicted RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 FBLN7Q53RD9 439 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 CCDC144NLQ6NUI1 221 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 ATRAIDQ6UW56 229 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 SLC16A13Q7RTY0 426 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 TMEM144Q7Z5S9 345 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 PPP1R27Q86WC6 154 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 MRPL41Q8IXM3 137 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 RNASEH2CQ8TDP1 164 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 P2RX4Q99571 388 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 SRSF8Q9BRL6 282 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 FBXL15Q9H469 300 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 C7orf69Q9H7B7 122 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 METTL1Q9UBP6 276 aaKnown RBP7.49□□□□□ -1.21
VPS25-205ENST00000590339 PXMP4Q9Y6I8 212 aa7.49□□□□□ -1.21
VPS25-205ENST00000590339 A0A1B0GV50 99 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 NBR2O15453 112 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 NDUFS6O75380 124 aaKnown RBP7.48□□□□□ -1.21
VPS25-205ENST00000590339 MOSP00540 346 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 HSPB1P04792 205 aaKnown RBP7.48□□□□□ -1.21
VPS25-205ENST00000590339 BCL2P10415 239 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 RPL29P47914 159 aaKnown RBP7.48□□□□□ -1.21
VPS25-205ENST00000590339 PRR20EP86478 221 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 PRR20CP86479 221 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 PRR20DP86480 221 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 PRR20BP86481 221 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 PRR20AP86496 221 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 PAX8Q06710 450 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 TNXAQ16473 311 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 KHDC3LQ587J8 217 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 TEPPQ6URK8 271 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 LCN15Q6UWW0 184 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 SVBPQ8N300 66 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 OR10G4Q8NGN3 311 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 OR10G9Q8NGN4 311 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 OR10G7Q8NGN6 311 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 CACNG8Q8WXS5 425 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 C22orf15Q8WYQ4 148 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 EAF1Q96JC9 268 aaPredicted RBP7.48□□□□□ -1.21
VPS25-205ENST00000590339 ACTR3CQ9C0K3 210 aaPredicted RBP7.48□□□□□ -1.21
VPS25-205ENST00000590339 SLC25A22Q9H936 323 aa7.48□□□□□ -1.21
VPS25-205ENST00000590339 HILPDAQ9Y5L2 63 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms