RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 HPGDSO60760 199 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 JTBO76095 146 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 SCAF4O95104 1147 aaKnown RBP5.68□□□□□ -1.5
NPC1-208ENST00000590301 CD5P06127 495 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 ZNF182P17025 639 aaPredicted RBP5.68□□□□□ -1.5
NPC1-208ENST00000590301 EDN2P20800 178 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 BMI1P35226 326 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 MFAP2P55001 183 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 APOC4P55056 127 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 MFAP4P55083 255 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 CMC4P56277 68 aaPredicted RBP5.68□□□□□ -1.5
NPC1-208ENST00000590301 HSPE1P61604 102 aaKnown RBP5.68□□□□□ -1.5
NPC1-208ENST00000590301 ERHP84090 104 aaKnown RBP5.68□□□□□ -1.5
NPC1-208ENST00000590301 PRCDQ00LT1 54 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 Q56UQ5 140 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 KIR2DL5AQ8N109 375 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 KIR2DL5BQ8NHK3 375 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 WFDC10AQ9H1F0 79 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 NSG2Q9Y328 171 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 X6R8D5 127 aa5.68□□□□□ -1.5
NPC1-208ENST00000590301 IGHV3-35A0A0C4DH35 117 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 FAM25AB3EWG3 89 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 FAM25CB3EWG5 89 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 FAM25GB3EWG6 89 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 F8W735 103 aaPredicted RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 CTSGP08311 255 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 PGAM2P15259 253 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 ADMP35318 185 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 SNCAP37840 140 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 NPBWR1P48145 328 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 MRPS10P82664 201 aaKnown RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 SSBP1Q04837 148 aaKnown RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 Q6ZWC4 215 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 LHFPL1Q86WI0 220 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 WFDC3Q8IUB2 231 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 CCDC71LQ8N9Z2 235 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 UBAC2Q8NBM4 344 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 ZFAND1Q8TCF1 268 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 MRGPRFQ96AM1 343 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 OR10C1Q96KK4 312 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 CHRDL1Q9BU40 450 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 C20orf24Q9BUV8 137 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 MRPS26Q9BYN8 205 aaKnown RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 C6orf62Q9GZU0 229 aaPredicted RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 RETNQ9HD89 108 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 RABL2AQ9UBK7 228 aaPredicted RBP5.67□□□□□ -1.5
NPC1-208ENST00000590301 MTFP1Q9UDX5 166 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 SMPXQ9UHP9 88 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 RABL2BQ9UNT1 228 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 CSMD3Q7Z407 3707 aa5.67□□□□□ -1.5
NPC1-208ENST00000590301 DBX1A6NMT0 343 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 GABARAPH6UMI1 98 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 I3L2K1 104 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 M0QYG6 137 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 CORTO00230 105 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 GNG7O60262 68 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 SCGB2A1O75556 95 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 MT-CO2P00403 227 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 IGKV1-39P01597 117 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 CD74P04233 296 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 CD3DP04234 171 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 IGKV1D-39P04432 117 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 AKR1C2P52895 323 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 SUB1P53999 127 aaKnown RBP eCLIP5.66□□□□□ -1.5
NPC1-208ENST00000590301 PIGPP57054 158 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 TAS2R19P59542 299 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 MEF2DQ14814 521 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 GPR107Q5VW38 600 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 FAM219AQ8IW50 185 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 STPG3Q8N7X2 389 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 TMEM229BQ8NBD8 167 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 TERB2Q8NHR7 220 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 RRNAD1Q96FB5 475 aaKnown RBP5.66□□□□□ -1.5
NPC1-208ENST00000590301 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 OVOL2Q9BRP0 275 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 GINS3Q9BRX5 216 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 PDCD10Q9BUL8 212 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 NXF2Q9GZY0 626 aaKnown RBP5.66□□□□□ -1.5
NPC1-208ENST00000590301 EXTL2Q9UBQ6 330 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 KLK11Q9UBX7 282 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 CACFD1Q9UGQ2 172 aa5.66□□□□□ -1.5
NPC1-208ENST00000590301 TRAV14DV4A0A0A6YYC5 116 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 IGHV3-21A0A0B4J1V1 117 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 IGHV7-4-1A0A0J9YVY3 117 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 C3orf85A0A1B0GTC6 90 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 YIF1AO95070 293 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 P0C879 139 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 PAFAH1B2P68402 229 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 TNFRSF9Q07011 255 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 PMS2P11Q13670 270 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 SPCS2Q15005 226 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 SURF2Q15527 256 aaPredicted RBP5.65□□□□□ -1.5
NPC1-208ENST00000590301 TRIM16LQ309B1 348 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 ODF3L2Q3SX64 289 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 PVRIGQ6DKI7 326 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 TMEM217Q8N7C4 229 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 SLC35G3Q8N808 338 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 TMEM116Q8NCL8 245 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 DUSP18Q8NEJ0 188 aa5.65□□□□□ -1.5
NPC1-208ENST00000590301 OR52I2Q8NH67 350 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms