RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 C8orf88P0DMB2 117 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 ZNF114Q8NC26 417 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 TXN2Q99757 166 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 CHRDL1Q9BU40 450 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 WFDC10AQ9H1F0 79 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 C5orf66Q9H5L9 145 aa11.66□□□□□ -0.54
SF3B3-215ENST00000577085 IGHV3OR16-8A0A075B7F1 116 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 FABP12A6NFH5 140 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 CCDC160A6NGH7 325 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 ST8SIA3O43173 380 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 MT-CO2P00403 227 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 SURF2Q15527 256 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-215ENST00000577085 MCFD2Q8NI22 146 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 SPAG8Q99932 426 aaPredicted RBP11.65□□□□□ -0.54
SF3B3-215ENST00000577085 MCUBQ9NWR8 336 aa11.65□□□□□ -0.54
SF3B3-215ENST00000577085 HUWE1Q7Z6Z7 4374 aaKnown RBP11.64□□□□□ -0.55
SF3B3-215ENST00000577085 A0A0B4J293 547 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 C15orf62A8K5M9 175 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 H3BMQ9 156 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 I3L2K1 104 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 CORTO00230 105 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 ZNF207O43670 478 aaKnown RBP11.64□□□□□ -0.55
SF3B3-215ENST00000577085 IGHV3-48P01763 117 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 OR5AC1P0C628 307 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 UCP1P25874 307 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 CASC10Q5T4H9 136 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 DUSP18Q8NEJ0 188 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 OR4C16Q8NGL9 310 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 SCGB3A2Q96PL1 93 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 TMEM222Q9H0R3 208 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 NAA60Q9H7X0 242 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 SCP2D1Q9UJQ7 156 aa11.64□□□□□ -0.55
SF3B3-215ENST00000577085 TENM3Q9P273 2699 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 RBMY1BA6NDE4 496 aaKnown RBP11.63□□□□□ -0.55
SF3B3-215ENST00000577085 RBMY1EA6NEQ0 496 aaKnown RBP11.63□□□□□ -0.55
SF3B3-215ENST00000577085 F8W735 103 aaPredicted RBP11.63□□□□□ -0.55
SF3B3-215ENST00000577085 K7EMT4 169 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 SCGB2A1O75556 95 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 CTSGP08311 255 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 RBMY1DP0C7P1 496 aaKnown RBP11.63□□□□□ -0.55
SF3B3-215ENST00000577085 ADMP35318 185 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 ETV6P41212 452 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 NPBWR1P48145 328 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 DHODHQ02127 395 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 FAM219AQ8IW50 185 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 OR51S1Q8NGJ8 323 aa11.63□□□□□ -0.55
SF3B3-215ENST00000577085 GSTZ1O43708 216 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 P0C879 139 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 FCGR2BP31994 310 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 LINC00322Q6ZN03 302 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 TMEM116Q8NCL8 245 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 RBPMSQ93062 196 aaKnown RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 RTBDNQ9BSG5 229 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 GGTLC1Q9BX51 225 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 SLIRPQ9GZT3 109 aaKnown RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 NXF2Q9GZY0 626 aaKnown RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 HIPK2Q9H2X6 1198 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 RETNQ9HD89 108 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.62□□□□□ -0.55
SF3B3-215ENST00000577085 KCNIP3Q9Y2W7 256 aa11.62□□□□□ -0.55
SF3B3-215ENST00000577085 LOC102724200A0A096LPH7 203 aaPredicted RBP11.61□□□□□ -0.55
SF3B3-215ENST00000577085 TRAV14DV4A0A0A6YYC5 116 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 ANKRD20A5PA0PJZ0 165 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 OR4C46A6NHA9 309 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 TSPAN4O14817 238 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 CDS2O95674 445 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 TNFSF8P32971 234 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 BMI1P35226 326 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 FAUP35544 74 aaKnown RBP11.61□□□□□ -0.55
SF3B3-215ENST00000577085 OPRK1P41145 380 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 ZFAND6Q6FIF0 208 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 FAM110AQ9BQ89 295 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 UBQLN2Q9UHD9 624 aa11.61□□□□□ -0.55
SF3B3-215ENST00000577085 IGHV7-4-1A0A0J9YVY3 117 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 CRYM-AS1A6NIL9 109 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 INS-IGF2F8WCM5 200 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 S100A5P33763 92 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 AP3S2P59780 193 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 SPCS3P61009 180 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 PYDC2Q56P42 97 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 GLYATL2Q8WU03 294 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 RHPN1-AS1Q9BWJ2 59 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 HEYLQ9NQ87 328 aaPredicted RBP11.6□□□□□ -0.55
SF3B3-215ENST00000577085 CACFD1Q9UGQ2 172 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 SMPXQ9UHP9 88 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 GPR132Q9UNW8 380 aa11.6□□□□□ -0.55
SF3B3-215ENST00000577085 KMT2CQ8NEZ4 4911 aaKnown RBP11.6□□□□□ -0.55
SF3B3-215ENST00000577085 IGHV3-49A0A0A0MS15 119 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 A0A0G2JRQ6 117 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 CEBPZOSA8MTT3 80 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 AKR1C4P17516 323 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 APOC4P55056 127 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 SELENOHQ8IZQ5 122 aaKnown RBP11.59□□□□□ -0.55
SF3B3-215ENST00000577085 IL17DQ8TAD2 202 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 CACNG5Q9UF02 275 aa11.59□□□□□ -0.55
SF3B3-215ENST00000577085 RPS10-NUDT3A0A1W2PQS6 291 aa11.58□□□□□ -0.56
SF3B3-215ENST00000577085 RNASE2P10153 161 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms