RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 CDK10Q15131 360 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 VMA21Q3ZAQ7 101 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 ZFP69Q49AA0 526 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 LINC01620Q4KN68 170 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 TMEM236Q5W0B7 351 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 OR10K2Q6IF99 312 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 ZNF880Q6PDB4 577 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 Q75L30 129 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 ZNF709Q8N972 641 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 OR13C3Q8NGS6 347 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 RXFP4Q8TDU9 374 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 FCGR1BQ92637 280 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 LINC01600Q96MT4 127 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 GPER1Q99527 375 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 TBX5Q99593 518 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 FAM192AQ9GZU8 254 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 METTL9Q9H1A3 318 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 DNAJC4Q9NNZ3 241 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 SDHAF2Q9NX18 166 aa2.42□□□□□ -2.02
HERC1-211ENST00000560983 IGHV3-21A0A0B4J1V1 117 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 IGKV1-6A0A0C4DH72 117 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 OR4C45A6NMZ5 311 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 LYRM9A8MSI8 78 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 BBIP1A8MTZ0 92 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ST8SIA3O43173 380 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 CRYZL1O95825 349 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 DHFRP00374 187 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 HBE1P02100 147 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ATP5G1P05496 136 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 DEFA4P12838 97 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 IGFBP3P17936 291 aaPredicted RBP2.41□□□□□ -2.02
HERC1-211ENST00000560983 ATP6V1B2P21281 511 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ZBTB25P24278 435 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 RPL27AP46776 148 aaKnown RBP2.41□□□□□ -2.02
HERC1-211ENST00000560983 ATP5G3P48201 142 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 CCR9P51686 369 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ZNF85Q03923 595 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 CD300CQ08708 224 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 TP53I3Q53FA7 332 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 OGFRL1Q5TC84 451 aaPredicted RBP2.41□□□□□ -2.02
HERC1-211ENST00000560983 AADACL4Q5VUY2 407 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ZNF773Q6PK81 442 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 VKORC1L1Q8N0U8 176 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.41□□□□□ -2.02
HERC1-211ENST00000560983 OR10H4Q8NGA5 316 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 GNPNAT1Q96EK6 184 aaPredicted RBP2.41□□□□□ -2.02
HERC1-211ENST00000560983 IL4I1Q96RQ9 567 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ATP6V0BQ99437 205 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 FEVQ99581 238 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 OR51E2Q9H255 320 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 TVP23BQ9NYZ1 205 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 ABRACLQ9P1F3 81 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 CACNG5Q9UF02 275 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 RABAC1Q9UI14 185 aa2.41□□□□□ -2.02
HERC1-211ENST00000560983 MACF1Q9UPN3 7388 aaKnown RBP2.4□□□□□ -2.02
HERC1-211ENST00000560983 A0A0J9YY99 117 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 IGLC7A0M8Q6 106 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 USP17L23D6RBM5 183 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 H3BNG1 76 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 K7EIM0 57 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 VCYO14598 125 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 PRKYO43930 277 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 CREBL2O60519 120 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 ZNF780AO75290 641 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 DCTN3O75935 186 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 YIF1AO95070 293 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 NXPH4O95158 308 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 OR2T7P0C7T2 308 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 RRASP10301 218 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 RAB3AP20336 220 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 M6PRP20645 277 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 DUTP33316 252 aaKnown RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 PSMD7P51665 324 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 DEFB1P60022 68 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 OR5I1Q13606 314 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 WFDC2Q14508 124 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 RTL8BQ17RB0 113 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 RRN3P1Q2M238 152 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 ACOT6Q3I5F7 207 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 PSMG4Q5JS54 123 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 GDF5OSQ5U4N7 250 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 TOMM20LQ6UXN7 152 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 ARPINQ7Z6K5 226 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 PUSL1Q8N0Z8 303 aaKnown RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 TMEM167AQ8TBQ9 72 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 MCUR1Q96AQ8 359 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 HOPXQ9BPY8 73 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 FAAP24Q9BTP7 215 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 PAXXQ9BUH6 204 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 PAK1IP1Q9NWT1 392 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 PPP1R14DQ9NXH3 145 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 C21orf62Q9NYP8 219 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 GNG8Q9UK08 70 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 PYGO1Q9Y3Y4 419 aa2.4□□□□□ -2.03
HERC1-211ENST00000560983 V9GYY5 206 aaPredicted RBP2.4□□□□□ -2.03
HERC1-211ENST00000560983 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
HERC1-211ENST00000560983 TRAV9-2A0A087WT02 112 aa2.39□□□□□ -2.03
HERC1-211ENST00000560983 A0A096LPF7 62 aa2.39□□□□□ -2.03
HERC1-211ENST00000560983 ZNF705GA8MUZ8 300 aaPredicted RBP2.39□□□□□ -2.03
HERC1-211ENST00000560983 H7C423 109 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms