RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 TMEM229BQ8NBD8 167 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 ZNF114Q8NC26 417 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 RNASE11Q8TAA1 199 aaKnown RBP12.81□□□□□ -0.36
GPHN-211ENST00000556020 ZFAND1Q8TCF1 268 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 MARCH1Q8TCQ1 289 aa12.81□□□□□ -0.36
GPHN-211ENST00000556020 IGHV3OR16-13A0A075B7E8 117 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 IGHV3-74A0A0B4J1X5 117 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 C15orf62A8K5M9 175 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 K7EMT4 169 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 ST8SIA3O43173 380 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 GNG7O60262 68 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 ATG12O94817 140 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 SNCAP37840 140 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 STEAP1BQ6NZ63 245 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 TERB2Q8NHR7 220 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 PDCD10Q9BUL8 212 aa12.8□□□□□ -0.36
GPHN-211ENST00000556020 SACSQ9NZJ4 4579 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 IGKV3-7A0A075B6H7 116 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 A0A0B4J293 547 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 IGHV7-4-1A0A0J9YVY3 117 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 OR4C46A6NHA9 309 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 GABARAPH6UMI1 98 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 CD74P04233 296 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 ETV6P41212 452 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 TFPI2P48307 235 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 HOXA1P49639 335 aaPredicted RBP12.79□□□□□ -0.36
GPHN-211ENST00000556020 TMEM116Q8NCL8 245 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 IL17DQ8TAD2 202 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 RRNAD1Q96FB5 475 aaKnown RBP12.79□□□□□ -0.36
GPHN-211ENST00000556020 ZNF414Q96IQ9 312 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 RNF2Q99496 336 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 TXN2Q99757 166 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 RHPN1-AS1Q9BWJ2 59 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 SMPXQ9UHP9 88 aa12.79□□□□□ -0.36
GPHN-211ENST00000556020 P0C879 139 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 RPL35AP18077 110 aaKnown RBP12.78□□□□□ -0.36
GPHN-211ENST00000556020 IL18Q14116 193 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 ODF3L2Q3SX64 289 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 OVOL2Q9BRP0 275 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 NXF2Q9GZY0 626 aaKnown RBP12.78□□□□□ -0.36
GPHN-211ENST00000556020 ENY2Q9NPA8 101 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 C14orf166Q9Y224 244 aaKnown RBP12.78□□□□□ -0.36
GPHN-211ENST00000556020 LYSTQ99698 3801 aa12.78□□□□□ -0.36
GPHN-211ENST00000556020 A0A0G2JRQ6 117 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 CHEK1O14757 476 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 FCGR2BP31994 310 aaPredicted RBP12.77□□□□□ -0.37
GPHN-211ENST00000556020 APOC4P55056 127 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 MEF2DQ14814 521 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 DIRAS2Q96HU8 199 aa12.77□□□□□ -0.37
GPHN-211ENST00000556020 TRAV14DV4A0A0A6YYC5 116 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 TEX13DA0A0J9YY54 714 aaPredicted RBP12.76□□□□□ -0.37
GPHN-211ENST00000556020 DISC1C4P0D8 188 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 OR5AC1P0C628 307 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 UCP1P25874 307 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 NPBWR1P48145 328 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 MRPS10P82664 201 aaKnown RBP12.76□□□□□ -0.37
GPHN-211ENST00000556020 SSBP1Q04837 148 aaKnown RBP12.76□□□□□ -0.37
GPHN-211ENST00000556020 DEFB135Q30KP9 77 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 APRG1Q8IVJ8 170 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 GBGT1Q8N5D6 347 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 SMIM4Q8WVI0 70 aa12.76□□□□□ -0.37
GPHN-211ENST00000556020 C6orf62Q9GZU0 229 aaPredicted RBP12.76□□□□□ -0.37
GPHN-211ENST00000556020 IGHV3-66A0A0C4DH42 116 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 RNASE2P10153 161 aaKnown RBP12.75□□□□□ -0.37
GPHN-211ENST00000556020 SUB1P53999 127 aaKnown RBP eCLIP12.75□□□□□ -0.37
GPHN-211ENST00000556020 ZNF124Q15973 351 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 TOMM20LQ6UXN7 152 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 OR4C16Q8NGL9 310 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 RAB2BQ8WUD1 216 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 OR10C1Q96KK4 312 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 GINS3Q9BRX5 216 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 RTBDNQ9BSG5 229 aaPredicted RBP12.75□□□□□ -0.37
GPHN-211ENST00000556020 TMEM222Q9H0R3 208 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 NAA60Q9H7X0 242 aa12.75□□□□□ -0.37
GPHN-211ENST00000556020 SPRY2O43597 315 aa12.74□□□□□ -0.37
GPHN-211ENST00000556020 AKAIN1P0CW23 69 aa12.74□□□□□ -0.37
GPHN-211ENST00000556020 Q6ZRM9 215 aa12.74□□□□□ -0.37
GPHN-211ENST00000556020 STPG3Q8N7X2 389 aa12.74□□□□□ -0.37
GPHN-211ENST00000556020 DYNC2LI1Q8TCX1 351 aa12.74□□□□□ -0.37
GPHN-211ENST00000556020 PUS1Q9Y606 427 aaKnown RBP eCLIP12.74□□□□□ -0.37
GPHN-211ENST00000556020 NOL3O60936 208 aaKnown RBP12.73□□□□□ -0.37
GPHN-211ENST00000556020 B3GALNT1O75752 331 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 APOHP02749 345 aaPredicted RBP12.73□□□□□ -0.37
GPHN-211ENST00000556020 OPRK1P41145 380 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 ZNF600Q6ZNG1 722 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 TCF24Q7RTU0 167 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 LHFPL5Q8TAF8 219 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 ST8SIA2Q92186 375 aa12.73□□□□□ -0.37
GPHN-211ENST00000556020 CCDC59Q9P031 241 aaKnown RBP12.73□□□□□ -0.37
GPHN-211ENST00000556020 MRPL36Q9P0J6 103 aaKnown RBP12.73□□□□□ -0.37
GPHN-211ENST00000556020 A0A0J9YWU9 116 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 A0A1B0GU03 582 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 INS-IGF2F8WCM5 200 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 CORTO00230 105 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 JTBO76095 146 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 NXPH3O95157 252 aa12.72□□□□□ -0.37
GPHN-211ENST00000556020 CDS2O95674 445 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 451.3 ms