RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 TCF24Q7RTU0 167 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 CMTM1Q8IZ96 169 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 TSPAN14Q8NG11 270 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 TMEM56Q96MV1 263 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 ATP6V0BQ99437 205 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 RARRES2Q99969 163 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 Q9H521 79 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 KIAA1109Q2LD37 5005 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 HECTD4Q9Y4D8 3996 aa8.45□□□□□ -1.06
PRPF40B-212ENST00000551111 TRAV14DV4A0A0A6YYC5 116 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 A0A1B0GU03 582 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 MPTX1A8MV57 137 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 M0QYG6 137 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 DFFBO76075 338 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 IGKV1-5P01602 117 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 ATF4P18848 351 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 PRCDQ00LT1 54 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 KCTD21Q4G0X4 260 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 H2BFWTQ7Z2G1 175 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 SNX29P2Q8IUI4 249 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 OR11H2Q8NH07 326 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 OR4A16Q8NH70 328 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 BORCS5Q969J3 196 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 ZFAND3Q9H8U3 227 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 FKBP11Q9NYL4 201 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 COMMD3Q9UBI1 195 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 FBXL17Q9UF56 701 aa8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 KLK5Q9Y337 293 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-212ENST00000551111 A0A0B4J293 547 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 GIG44P09565 113 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 P0C879 139 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 DEFB131AP59861 70 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 HSPE1P61604 102 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 TSPAN5P62079 268 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 NCS1P62166 190 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 RELQ04864 619 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 RNASE12Q5GAN4 147 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 ZNF114Q8NC26 417 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 MS4A6AQ9H2W1 248 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 VSIRQ9H7M9 311 aa8.43□□□□□ -1.06
PRPF40B-212ENST00000551111 A0A0G2JRQ6 117 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 GNG7O60262 68 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 HPGDSO60760 199 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 TMEM127O75204 238 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 ELK1P19419 428 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 PPP5CP53041 499 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 LGALS9CQ6DKI2 356 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 TP53RKQ96S44 253 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 TSC22D3Q99576 134 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 TXN2Q99757 166 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 FNDC4Q9H6D8 234 aaPredicted RBP8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 PUS1Q9Y606 427 aaKnown RBP eCLIP8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 DNAH2Q9P225 4427 aa8.42□□□□□ -1.06
PRPF40B-212ENST00000551111 FAT2Q9NYQ8 4349 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 ST8SIA3O43173 380 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 TMEM50AO95807 157 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 CA1P00915 261 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 ETV6P41212 452 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 UCP3P55916 312 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 VBP1P61758 197 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 SP6Q3SY56 376 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 CROCCP3Q8IVE0 287 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 C11orf45Q8TAV5 145 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 GATAD1Q8WUU5 269 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 FAM212BQ9NTI7 297 aaPredicted RBP8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 KLK11Q9UBX7 282 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 DNAH17Q9UFH2 4485 aa8.41□□□□□ -1.06
PRPF40B-212ENST00000551111 APOA1P02647 267 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 RBMY1A1P0DJD3 496 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 RBMY1CP0DJD4 496 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 RNASE2P10153 161 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 ERHP84090 104 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 RBMY1FQ15415 496 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 RBMS2Q15434 407 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 DMRTA1Q5VZB9 504 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 PVRIGQ6DKI7 326 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 Q6ZRM9 215 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 LHFPL1Q86WI0 220 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 TMEM217Q8N7C4 229 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 Q8NAQ8 132 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 OR4D10Q8NGI6 311 aa8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 C6orf62Q9GZU0 229 aaPredicted RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
PRPF40B-212ENST00000551111 PCLOQ9Y6V0 5065 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 KNCNA6PVL3 124 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 DNASE2O00115 360 aaPredicted RBP8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 PGAM2P15259 253 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 C4BPBP20851 252 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 RCVRNP35243 200 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 RPL11P62913 178 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 LPCAT3Q6P1A2 487 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 ZNF600Q6ZNG1 722 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 DUSP18Q8NEJ0 188 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 OR52I2Q8NH67 350 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 CMTM3Q96MX0 182 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 FUNDC2Q9BWH2 189 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 NAA50Q9GZZ1 169 aaKnown RBP8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 SCPEP1Q9HB40 452 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 RABAC1Q9UI14 185 aa8.39□□□□□ -1.07
PRPF40B-212ENST00000551111 APLNQ9ULZ1 77 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms