RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 BRI3O95415 125 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 CA2P00918 260 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SULT1A3P0DMM9 295 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SULT1A4P0DMN0 295 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 CNTFRP26992 372 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 RIPPLY3P57055 190 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 OR2B8PP59922 312 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 BLCAPP62952 87 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 CX3CL1P78423 397 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SMCO1Q147U7 214 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 MRGPRG-AS1Q2M3A8 158 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 AKIRIN2Q53H80 203 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 LCE1EQ5T753 118 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 KRTAP5-4Q6L8H1 288 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SSX9Q7RTT3 188 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 LYZL2Q7Z4W2 148 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SLC35E3Q7Z769 313 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 OR52E5Q8NH55 327 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 OR4A16Q8NH70 328 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 OR2T6Q8NHC8 308 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 ASB13Q8WXK3 278 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 ARPC1AQ92747 370 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 DUX5Q96PT3 197 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 SEC22CQ9BRL7 303 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 OR51J1Q9H342 316 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 ZNF702PQ9H963 129 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 BEX1Q9HBH7 125 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 TNFRSF19Q9NS68 423 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 JMJD1CQ15652 2540 aa4.5□□□□□ -1.69
SCAF11-213ENST00000550629 A0A0G2JRQ6 117 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TEX50A0A1B0GTY4 177 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM89A2RUT3 159 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 FCN1O00602 326 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 SSNA1O43805 119 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 PITX3O75364 302 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TRAPPC2P0DI81 140 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TRAPPC2BP0DI82 140 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 RPL27AP46776 148 aaKnown RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 ATP5IP56385 69 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 SPCS3P61009 180 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 HSPE1P61604 102 aaKnown RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 GNB1P62873 340 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 CYCSP99999 105 aaKnown RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM267Q0VDI3 215 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 PJVKQ0ZLH3 352 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 FXYD3Q14802 87 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TNXAQ16473 311 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 GGNBP1Q5YKI7 109 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 Q6ZSV7 163 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 COMMD1Q8N668 190 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 OR52B4Q8NGK2 314 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 OR5M8Q8NGP6 311 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 OR1L8Q8NGR8 309 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 SGMS2Q8NHU3 365 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 SRSF12Q8WXF0 261 aaKnown RBP4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TMEM158Q8WZ71 300 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 GPR146Q96CH1 333 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 HSPB9Q9BQS6 159 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 PDCD10Q9BUL8 212 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 MAP6D1Q9H9H5 199 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 NDUFA4L2Q9NRX3 87 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 ZFP57Q9NU63 452 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 HSPB7Q9UBY9 170 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 CACNG5Q9UF02 275 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 OR51B2Q9Y5P1 312 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 ALG5Q9Y673 324 aa4.49□□□□□ -1.69
SCAF11-213ENST00000550629 TRAV3A0A0B4J244 114 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 TRAV41A0A0B4J266 112 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 A0A1W2PN81 502 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 CLPSL1A2RUU4 121 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 MSGN1A6NI15 193 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 NPIPB5A8MRT5 1133 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 H3BUA1 57 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 ATP6V0E1O15342 81 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 CYB5BO43169 146 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 ST8SIA3O43173 380 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 MED6O75586 246 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 ADAP1O75689 374 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 HOXB5P09067 269 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 OR9G9P0C7N8 305 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 CHRNA7P36544 502 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 VDAC2P45880 294 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-213ENST00000550629 SLC35B1P78383 322 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 NDPQ00604 133 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 PRCDQ00LT1 54 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 TNFRSF9Q07011 255 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 IAH1Q2TAA2 248 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-213ENST00000550629 KLK9Q2XQG4 91 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 C9orf152Q5JTZ5 239 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 GSG1LQ6UXU4 331 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 STPG2Q8N412 459 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 TTC9CQ8N5M4 171 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 OR1L6Q8NGR2 347 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 OR1S1Q8NH92 325 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 LINC01006Q8NI28 216 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 GRPEL2Q8TAA5 225 aa4.48□□□□□ -1.69
SCAF11-213ENST00000550629 RBMXL1Q96E39 390 aaKnown RBP4.48□□□□□ -1.69
SCAF11-213ENST00000550629 CIB3Q96Q77 187 aaPredicted RBP4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms