RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
BNIP3-202ENST00000540159 HELTA6NFD8 242 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 GGTLC3B5MD39 225 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 TNFSF4P23510 183 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 GNG4P50150 75 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 ZNF503Q96F45 646 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 EAF1Q96JC9 268 aaPredicted RBP11.11□□□□□ -0.63
BNIP3-202ENST00000540159 MRPL18Q9H0U6 180 aaKnown RBP11.11□□□□□ -0.63
BNIP3-202ENST00000540159 SAP30LQ9HAJ7 183 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 RPUSD1Q9UJJ7 312 aaKnown RBP11.11□□□□□ -0.63
BNIP3-202ENST00000540159 FOXA2Q9Y261 457 aaPredicted RBP11.11□□□□□ -0.63
BNIP3-202ENST00000540159 DPRXA6NFQ7 191 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 MOSP00540 346 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 ZNF788Q6ZQV5 615 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 TMEM144Q7Z5S9 345 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 BAGE3Q86Y29 109 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 BAGE2Q86Y30 109 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 MMD2Q8IY49 270 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 GBGT1Q8N5D6 347 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 ZNF439Q8NDP4 499 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 OR52E5Q8NH55 327 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 IL19Q9UHD0 177 aa11.11□□□□□ -0.63
BNIP3-202ENST00000540159 A0A0G2JNJ9 132 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 UPK2O00526 184 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 SLC25A17O43808 307 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 SERF1AO75920 110 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 OR5G3P0C626 314 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 ST6GALNAC3Q8NDV1 305 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 GSX1Q9H4S2 264 aaPredicted RBP11.1□□□□□ -0.63
BNIP3-202ENST00000540159 FKBP11Q9NYL4 201 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 MRPL36Q9P0J6 103 aaKnown RBP11.1□□□□□ -0.63
BNIP3-202ENST00000540159 Q9UFV3 132 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 EREGO14944 169 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 TOMM20LQ6UXN7 152 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 BLNKQ8WV28 456 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 NPIPB3Q92617 1050 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 ABHD17AQ96GS6 310 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 CDKN1AP38936 164 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 ADIPOQQ15848 244 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 TMEM200BQ69YZ2 307 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 ZNF600Q6ZNG1 722 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 CMTM2Q8TAZ6 248 aa11.1□□□□□ -0.63
BNIP3-202ENST00000540159 TRGV8A0A0C4DH27 118 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 CFHR2P36980 270 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 UBE2L3P68036 154 aaKnown RBP11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRR20EP86478 221 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRR20CP86479 221 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRR20DP86480 221 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRR20BP86481 221 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRR20AP86496 221 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRCDQ00LT1 54 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 LEMD1Q68G75 181 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 REC114Q7Z4M0 266 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 NAT8BQ9UHF3 227 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 SLC45A2Q9UMX9 530 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 hADV38S2A0JD32 116 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 GATCO43716 136 aaKnown RBP11.09□□□□□ -0.63
BNIP3-202ENST00000540159 CRISP2P16562 243 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 ORM2P19652 201 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 KIR2DS2P43631 304 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 RPL29P47914 159 aaKnown RBP11.09□□□□□ -0.63
BNIP3-202ENST00000540159 GNG5P63218 68 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 CR1LQ2VPA4 569 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 TMEM108Q6UXF1 575 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 SLC25A48Q6ZT89 311 aaKnown RBP11.09□□□□□ -0.63
BNIP3-202ENST00000540159 OR5AU1Q8NGC0 362 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 FAM168AQ92567 244 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 SAMD10Q9BYL1 202 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PRNDQ9UKY0 176 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 TP53TG3Q9ULZ0 132 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 PAM16Q9Y3D7 125 aa11.09□□□□□ -0.63
BNIP3-202ENST00000540159 A8MWP6 167 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 RNASE2P10153 161 aaKnown RBP11.08□□□□□ -0.64
BNIP3-202ENST00000540159 CNTFRP26992 372 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 TMPRSS3P57727 454 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 Q6ZS92 163 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 TBX15Q96SF7 602 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 HSPB9Q9BQS6 159 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 FNDC4Q9H6D8 234 aaPredicted RBP11.08□□□□□ -0.64
BNIP3-202ENST00000540159 TYMSP04818 313 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 LCN2P80188 198 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 WT1-ASQ06250 92 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 BATFQ16520 125 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 AARDQ4LEZ3 155 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 KIR3DL3Q8N743 410 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 OR5R1Q8NH85 324 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 VN1R17PQ8TDU5 208 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 ZNF714Q96N38 554 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 ASCL2Q99929 193 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 TUBG2Q9NRH3 451 aa11.08□□□□□ -0.64
BNIP3-202ENST00000540159 MT-CO2P00403 227 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 PMCHP20382 165 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 RPL8P62917 257 aaKnown RBP11.07□□□□□ -0.64
BNIP3-202ENST00000540159 FLYWCH2Q96CP2 140 aaKnown RBP11.07□□□□□ -0.64
BNIP3-202ENST00000540159 RNF114Q9Y508 228 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 LY6HO94772 140 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 APOA2P02652 100 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 RANP62826 216 aaKnown RBP11.07□□□□□ -0.64
BNIP3-202ENST00000540159 FOXL1Q12952 345 aa11.07□□□□□ -0.64
BNIP3-202ENST00000540159 RPEL1Q2QD12 228 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 94.3 ms