RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FER1L6-AS1Q8NA97 138 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 TOMM7Q9P0U1 55 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 KLF12Q9Y4X4 402 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 LOC101059948A0A1B0GTJ6 334 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 ZNF815PA8K554 130 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 PCOLCEQ15113 449 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 ORMDL3Q8N138 153 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 CIARTQ8N365 385 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 MCM3APO60318 1980 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 ZNF831Q5JPB2 1677 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 IGHV3-49A0A0A0MS15 119 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 COLCA2A8K830 154 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 C4orf51C9J302 202 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 AMBPP02760 352 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 PAX1P15863 534 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 PYY3Q5JQD4 70 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 COL4A1P02462 1669 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 COL4A5P29400 1685 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 HSD52Q0P140 79 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 NXT2Q9NPJ8 142 aaKnown RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 MARF1Q9Y4F3 1742 aaKnown RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 CCDC88CQ9P219 2028 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 SPAG17Q6Q759 2223 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 APOBEC3AP31941 199 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 RNASE4P34096 147 aaKnown RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 ATP5G3P48201 142 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 SPRED2Q7Z698 418 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 ITLN2Q8WWU7 325 aaPredicted RBP8.39□□□□□ -1.07
COL4A6-208ENST00000538570 CTHRC1Q96CG8 243 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 FBXL15Q9H469 300 aa8.39□□□□□ -1.07
COL4A6-208ENST00000538570 MUC21A0A0G2JKD1 596 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 MUC21A0A140T8X8 626 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 GHRHP01286 108 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 MUC21Q5SSG8 566 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 TDGF1P13385 188 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
COL4A6-208ENST00000538570 Q6ZT83 130 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 ZNF664Q8N3J9 261 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 C12orf77C9JDV5 145 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 LEPP41159 167 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 SAP25Q8TEE9 199 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 C21orf62Q9NYP8 219 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 S4R3C0 116 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 IGKV1D-33P01593 117 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 IGKV1-33P01594 117 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 PPP1R27Q86WC6 154 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 RNASEH2CQ8TDP1 164 aaKnown RBP8.38□□□□□ -1.07
COL4A6-208ENST00000538570 Q9H3A6 140 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 QSER1Q2KHR3 1735 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 DPM3Q9P2X0 92 aa8.38□□□□□ -1.07
COL4A6-208ENST00000538570 ARPC1AQ92747 370 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 GDF15Q99988 308 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 C17orf98A8MV24 154 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 MESP2Q0VG99 397 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 OR10J3Q5JRS4 329 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 PILRBQ9UKJ0 227 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 SLC25A20O43772 301 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 GLRXP35754 106 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 IGLV3-21P80748 117 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-208ENST00000538570 EGR4Q05215 589 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 MIR17HGQ75NE6 70 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 LINC01587Q99440 93 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 Q8NFD4 153 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 CACNG8Q8WXS5 425 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.37□□□□□ -1.07
COL4A6-208ENST00000538570 RAMP3O60896 148 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 ADAMTSL1Q8N6G6 1762 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 TMEM8BA6NDV4 472 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE2AQ6NT46 116 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 C1QL2Q7Z5L3 287 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 C1QL4Q86Z23 238 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 RTBDNQ9BSG5 229 aaPredicted RBP8.37□□□□□ -1.07
COL4A6-208ENST00000538570 OTORQ9NRC9 128 aa8.37□□□□□ -1.07
COL4A6-208ENST00000538570 RGPD4Q7Z3J3 1758 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 LY75O60449 1722 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE12JA6NER3 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 HIGD1CA8MV81 97 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 A8MWP6 167 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE7O76087 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE12FP0CL80 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE12GP0CL81 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE12IP0CL82 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE4Q13068 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 ZNF585BQ52M93 769 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 CSTL1Q9H114 145 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 FOXD3Q9UJU5 478 aaPredicted RBP8.36□□□□□ -1.07
COL4A6-208ENST00000538570 IGHV2-70P01814 119 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 PMVKQ15126 192 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 CLEC19AQ6UXS0 136 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 PRR19A6NJB7 356 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 PROB1E7EW31 1015 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 LINC01560Q8TB33 94 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 FCN3O75636 299 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 SNHG12Q9BXW3 62 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 KIAA1217Q5T5P2 1943 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 ANKRD31Q8N7Z5 1873 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 DLEC1Q9Y238 1755 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 GAGE12HA6NDE8 117 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 CXCL1P09341 107 aa8.36□□□□□ -1.07
COL4A6-208ENST00000538570 ATP1A1-AS1Q5TC04 95 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 150.7 ms