RNA–Protein interactions for RNA: ENST00000536876.5

LTBR-206, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5

Gene LTBR, Length 842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-206ENST00000536876 TMEM14BQ9NUH8 114 aa12.67□□□□□ -0.38
LTBR-206ENST00000536876 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 A0A0A6YYH2 397 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 LOC100506127A0A0U1RQW1 187 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 A6NJ64 397 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
LTBR-206ENST00000536876 SNAPC5O75971 98 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 YIF1AO95070 293 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 KRASP01116 189 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 F2RP25116 425 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 TSPAN14Q8NG11 270 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 TMEM56Q96MV1 263 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 AUNIPQ9H7T9 357 aa12.66□□□□□ -0.38
LTBR-206ENST00000536876 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 IGHV3-66A0A0C4DH42 116 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 MEIS3P1A6NDR6 274 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 PRSS29PA6NIE9 313 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 PGLYRP1O75594 196 aaPredicted RBP12.65□□□□□ -0.38
LTBR-206ENST00000536876 DFFBO76075 338 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 MT-CO2P00403 227 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 AMBPP02760 352 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 EIF4EP06730 217 aaKnown RBP12.65□□□□□ -0.38
LTBR-206ENST00000536876 LPAR6P43657 344 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 HERV-K104P61576 105 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 TOMM20LQ6UXN7 152 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 ZNF114Q8NC26 417 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 OR5AP2Q8NGF4 316 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 MISP3Q96FF7 219 aa12.65□□□□□ -0.38
LTBR-206ENST00000536876 TRAV2A0A0B4J234 112 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 CBX5P45973 191 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 MFAP4P55083 255 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 MOB3AQ96BX8 217 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 RNF126Q9BV68 326 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 Q9H521 79 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 DIABLOQ9NR28 239 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 FKBP11Q9NYL4 201 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 PRNDQ9UKY0 176 aa12.64□□□□□ -0.39
LTBR-206ENST00000536876 NACAE9PAV3 2078 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 LRP1BQ9NZR2 4599 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 ST8SIA3O43173 380 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 CD5P06127 495 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 MIFP14174 115 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 PVRIGQ6DKI7 326 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 ZNF767PQ75MW2 155 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 CENPSQ8N2Z9 138 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 CSNK1G2-AS1Q8NCQ2 148 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 TXN2Q99757 166 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 YTHDF1Q9BYJ9 559 aaKnown RBP12.63□□□□□ -0.39
LTBR-206ENST00000536876 ANAPC10Q9UM13 185 aa12.63□□□□□ -0.39
LTBR-206ENST00000536876 A0A1B0GU03 582 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 KNCNA6PVL3 124 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 DNASE2O00115 360 aaPredicted RBP12.62□□□□□ -0.39
LTBR-206ENST00000536876 ATP6V1G2O95670 118 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 IGKV1-39P01597 117 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 IGKV1D-39P04432 117 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 C12orf74Q32Q52 190 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 STHQ8IWL8 128 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 TSC22D3Q99576 134 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 IFT46Q9NQC8 304 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 CLEC5AQ9NY25 188 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 EHFQ9NZC4 300 aa12.62□□□□□ -0.39
LTBR-206ENST00000536876 K7EQG2 157 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 M0R2N4 97 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 NEDD8Q15843 81 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 ZNF575Q86XF7 245 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 CMTM1Q8IZ96 169 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 POM121L12Q8N7R1 296 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 GINS3Q9BRX5 216 aa12.61□□□□□ -0.39
LTBR-206ENST00000536876 ZNF2Q9BSG1 426 aaPredicted RBP12.61□□□□□ -0.39
LTBR-206ENST00000536876 PUS1Q9Y606 427 aaKnown RBP eCLIP12.61□□□□□ -0.39
LTBR-206ENST00000536876 GNG7O60262 68 aa12.6□□□□□ -0.39
LTBR-206ENST00000536876 RFX2P48378 723 aa12.6□□□□□ -0.39
LTBR-206ENST00000536876 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
LTBR-206ENST00000536876 DHRS11Q6UWP2 260 aa12.6□□□□□ -0.39
LTBR-206ENST00000536876 PINX1Q96BK5 328 aaKnown RBP12.6□□□□□ -0.39
LTBR-206ENST00000536876 SEC22AQ96IW7 307 aa12.6□□□□□ -0.39
LTBR-206ENST00000536876 MRPL36Q9P0J6 103 aaKnown RBP12.6□□□□□ -0.39
LTBR-206ENST00000536876 DEFB131BA0A096LNP1 70 aa12.59□□□□□ -0.39
LTBR-206ENST00000536876 SPP1P10451 314 aa12.59□□□□□ -0.39
LTBR-206ENST00000536876 RPL11P62913 178 aaKnown RBP12.59□□□□□ -0.39
LTBR-206ENST00000536876 MORN3Q6PF18 240 aaPredicted RBP12.59□□□□□ -0.39
LTBR-206ENST00000536876 DCANP1Q8TF63 244 aa12.59□□□□□ -0.39
LTBR-206ENST00000536876 RABAC1Q9UI14 185 aa12.59□□□□□ -0.39
LTBR-206ENST00000536876 PMP2P02689 132 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 ZNF688P0C7X2 276 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 TGFBR1P36897 503 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 TMEM41BQ5BJD5 291 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 ZNF600Q6ZNG1 722 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 Q6ZR54 194 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 GRAMD2BQ96HH9 432 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 TBC1D24Q9ULP9 559 aa12.58□□□□□ -0.4
LTBR-206ENST00000536876 APOBP04114 4563 aaKnown RBP12.58□□□□□ -0.4
LTBR-206ENST00000536876 GPR31O00270 319 aa12.57□□□□□ -0.4
LTBR-206ENST00000536876 TMEM127O75204 238 aa12.57□□□□□ -0.4
LTBR-206ENST00000536876 S100GP29377 79 aa12.57□□□□□ -0.4
LTBR-206ENST00000536876 TAS2R46P59540 309 aa12.57□□□□□ -0.4
LTBR-206ENST00000536876 IZUMO4Q1ZYL8 232 aa12.57□□□□□ -0.4
LTBR-206ENST00000536876 LGALS9BQ3B8N2 356 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms