RNA–Protein interactions for RNA: ENST00000524556.1

CSTF3-204, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3

Gene CSTF3, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-204ENST00000524556 FAM231CP0DMU5 169 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 FGF9P31371 208 aaPredicted RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 HERV-K104P61576 105 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 RPL11P62913 178 aaKnown RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 TOMM20LQ6UXN7 152 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 TRPT1Q86TN4 253 aaKnown RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 TPRA1Q86W33 373 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 OR5AP2Q8NGF4 316 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 KRTAP4-5Q9BYR2 181 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 TMEM14BQ9NUH8 114 aa10.63□□□□□ -0.71
CSTF3-204ENST00000524556 RRP15Q9Y3B9 282 aaKnown RBP10.63□□□□□ -0.71
CSTF3-204ENST00000524556 DEFB131BA0A096LNP1 70 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 IGHV3-66A0A0C4DH42 116 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 M0R2N4 97 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 GNG7O60262 68 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 MT-CO2P00403 227 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 AMBPP02760 352 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 SPP1P10451 314 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 SFXN4Q6P4A7 337 aa10.62□□□□□ -0.71
CSTF3-204ENST00000524556 TXNL4BQ9NX01 149 aaKnown RBP10.62□□□□□ -0.71
CSTF3-204ENST00000524556 C4BPBP20851 252 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 LGALS9BQ3B8N2 356 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 DHRS11Q6UWP2 260 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 ZNF114Q8NC26 417 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 TSPAN14Q8NG11 270 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 OR5H6Q8NGV6 325 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 SLC25A38Q96DW6 304 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 TSC22D3Q99576 134 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 AUNIPQ9H7T9 357 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 RABAC1Q9UI14 185 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 CELA1Q9UNI1 258 aa10.61□□□□□ -0.71
CSTF3-204ENST00000524556 A0A0A6YYH2 397 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 A6NJ64 397 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 CBX5P45973 191 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 SCAND1P57086 179 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 UBE2UQ5VVX9 321 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 CSNK1G2-AS1Q8NCQ2 148 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 NRG4Q8WWG1 115 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 PINX1Q96BK5 328 aaKnown RBP10.6□□□□□ -0.71
CSTF3-204ENST00000524556 MOB3AQ96BX8 217 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 NDUFAF3Q9BU61 184 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 TMEM231Q9H6L2 316 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 ZFAND3Q9H8U3 227 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 TBC1D24Q9ULP9 559 aa10.6□□□□□ -0.71
CSTF3-204ENST00000524556 PUS1Q9Y606 427 aaKnown RBP eCLIP10.6□□□□□ -0.71
CSTF3-204ENST00000524556 KNCNA6PVL3 124 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 K7EQG2 157 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 ZNF767PQ75MW2 155 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 GRAMD2BQ96HH9 432 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 ZNF2Q9BSG1 426 aaPredicted RBP10.59□□□□□ -0.71
CSTF3-204ENST00000524556 CLEC5AQ9NY25 188 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 EHFQ9NZC4 300 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 BLOC1S6Q9UL45 172 aa10.59□□□□□ -0.71
CSTF3-204ENST00000524556 MEIS3P1A6NDR6 274 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 SDC2P34741 201 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 NPBWR1P48145 328 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 RFX2P48378 723 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 PRCDQ00LT1 54 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 CMTM1Q8IZ96 169 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 STXBP6Q8NFX7 210 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 OR4A16Q8NH70 328 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 SCRT1Q9BWW7 348 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 DIABLOQ9NR28 239 aa10.58□□□□□ -0.72
CSTF3-204ENST00000524556 LRP1BQ9NZR2 4599 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 A0A1B0GU03 582 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 A0A1W2PS18 150 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 GPR31O00270 319 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 TMEM50AO95807 157 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 CLEC2LP0C7M8 214 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 ZNF688P0C7X2 276 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 NPPCP23582 126 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 ERHP84090 104 aaKnown RBP10.57□□□□□ -0.72
CSTF3-204ENST00000524556 ACTL10Q5JWF8 245 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 IFT46Q9NQC8 304 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 FAM212BQ9NTI7 297 aaPredicted RBP10.57□□□□□ -0.72
CSTF3-204ENST00000524556 SSR3Q9UNL2 185 aa10.57□□□□□ -0.72
CSTF3-204ENST00000524556 PMP2P02689 132 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 NPY1RP25929 384 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 HSPE1P61604 102 aaKnown RBP10.56□□□□□ -0.72
CSTF3-204ENST00000524556 MXD1Q05195 221 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 IDNKQ5T6J7 187 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 Q6ZR54 194 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 H2BFWTQ7Z2G1 175 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 ZNF575Q86XF7 245 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 DCANP1Q8TF63 244 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 SEC22AQ96IW7 307 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 FXYD6Q9H0Q3 95 aa10.56□□□□□ -0.72
CSTF3-204ENST00000524556 IFNA10P01566 189 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 CRYBB3P26998 211 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 PSMB9P28065 219 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 P2RY1P47900 373 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 CNBD2Q96M20 576 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 METTL26Q96S19 204 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 ANAPC10Q9UM13 185 aa10.55□□□□□ -0.72
CSTF3-204ENST00000524556 IFNA21P01568 189 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 IFNA17P01571 189 aa10.54□□□□□ -0.72
CSTF3-204ENST00000524556 IGKV1-39P01597 117 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms