RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 S100A16Q96FQ6 103 aaKnown RBP6.22□□□□□ -1.41
HDAC3-216ENST00000523088 RARRES2Q99969 163 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 SFXN3Q9BWM7 321 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CHST6Q9GZX3 395 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CDIP1Q9H305 208 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 POLR1DQ9Y2S0 133 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 INSIG2Q9Y5U4 225 aa6.22□□□□□ -1.41
HDAC3-216ENST00000523088 CRYBG3Q68DQ2 2970 aa6.21□□□□□ -1.41
HDAC3-216ENST00000523088 CENPEQ02224 2701 aa6.21□□□□□ -1.41
HDAC3-216ENST00000523088 MYO9AB2RTY4 2548 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 TRAV9-2A0A087WT02 112 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 NPIPB11E5RHQ5 1161 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 FXYD1O00168 92 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 NDUFC2O95298 119 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 TBX6O95947 436 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 CA2P00918 260 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 LGALS1P09382 135 aaKnown RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 IGLC6P0CF74 106 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 FABP2P12104 132 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 SLC25A6P12236 298 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 OPRM1P35372 400 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 SSR2P43308 183 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 LPAR6P43657 344 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 P2RX1P51575 399 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 LIM2P55344 173 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 GAGE2BQ13066 116 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 CR1LQ2VPA4 569 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ACSF3Q4G176 576 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 SPINK14Q6IE38 97 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 MORN3Q6PF18 240 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 LCN15Q6UWW0 184 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 DPPA3Q6W0C5 159 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 Q6ZWC4 215 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF101Q8IZC7 436 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ZFP62Q8NB50 900 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 APCDD1LQ8NCL9 501 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 NFAM1Q8NET5 270 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 GJC3Q8NFK1 279 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 OR10AG1Q8NH19 301 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 OR52P1PQ8NH57 321 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 PIFOQ8TCI5 191 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 RTN4IP1Q8WWV3 396 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ADAT3Q96EY9 351 aaPredicted RBP6.21□□□□□ -1.42
HDAC3-216ENST00000523088 VKORC1Q9BQB6 163 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 PBOV1Q9GZY1 135 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 TPSG1Q9NRR2 321 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF835Q9Y2P0 537 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ITPR2Q14571 2701 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 NCKAP5O14513 1909 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF407Q9C0G0 2248 aa6.21□□□□□ -1.42
HDAC3-216ENST00000523088 TEX15Q9BXT5 2789 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 SAA2-SAA4A0A096LPE2 208 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF253O75346 499 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 HLA-DPB1P04440 258 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 OR9G9P0C7N8 305 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 TFPIP10646 304 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 COX6B1P14854 86 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 KLK2P20151 261 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 FABP6P51161 128 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 DLX1P56177 255 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 RPS4XP62701 263 aaKnown RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 HES1Q14469 280 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 OR2T5Q6IEZ7 315 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 TMEM64Q6YI46 380 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 C10orf111Q8N326 155 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 SIGLECL1Q8N7X8 197 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 Q8N976 141 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 OR4K17Q8NGC6 315 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 OR2T29Q8NH02 315 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 C18orf32Q8TCD1 76 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 ITLN2Q8WWU7 325 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 GEMIN6Q8WXD5 167 aaKnown RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 RASL10AQ92737 203 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 MRPL53Q96EL3 112 aaKnown RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 TMEM222Q9H0R3 208 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 ABRACLQ9P1F3 81 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 ZNF257Q9Y2Q1 563 aa6.2□□□□□ -1.42
HDAC3-216ENST00000523088 SF3B6Q9Y3B4 125 aaKnown RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 SIRT4Q9Y6E7 314 aaPredicted RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 UTP20O75691 2785 aaKnown RBP6.2□□□□□ -1.42
HDAC3-216ENST00000523088 EML6Q6ZMW3 1958 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 A0A096LPK6 155 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 ARRDC5A6NEK1 342 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 FAM90A26D6RGX4 464 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 CLDN14O95500 239 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 GPX3P22352 226 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 RBMXP38159 391 aaKnown RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 ASIPP42127 132 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 DAPP51397 102 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 IGLV3-21P80748 117 aaPredicted RBP6.19□□□□□ -1.42
HDAC3-216ENST00000523088 OR4C11Q6IEV9 310 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 Q6ZRG5 221 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 PRIMA1Q86XR5 153 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 ATOH7Q8N100 152 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 LINC00471Q8N535 108 aa6.19□□□□□ -1.42
HDAC3-216ENST00000523088 OR5D14Q8NGL3 314 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms