RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 ZNF414Q96IQ9 312 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 SCP2D1Q9UJQ7 156 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 ZNF443Q9Y2A4 671 aaPredicted RBP3.72□□□□□ -1.81
NIPBL-204ENST00000504430 DISP2A7MBM2 1401 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 DNMBPQ6XZF7 1577 aa3.72□□□□□ -1.81
NIPBL-204ENST00000504430 DENND4CQ5VZ89 1909 aa3.71□□□□□ -1.81
NIPBL-204ENST00000504430 LINC00862A6NCI5 91 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 P0DMU3 169 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 FAM231AP0DMU4 169 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 FAM231CP0DMU5 169 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 PRR30Q53SZ7 412 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-204ENST00000504430 OR5A2Q8NGI9 324 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 TMEM204Q9BSN7 226 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 C16orf95Q9H693 158 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF586Q9NXT0 402 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 DPM3Q9P2X0 92 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 TRPM6Q9BX84 2022 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 C1QAP02745 245 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 CD14P08571 375 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 SPINK8P0C7L1 97 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 KRTAP15-1Q3LI76 137 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
NIPBL-204ENST00000504430 SLC25A34Q6PIV7 304 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 NR2C2APQ86WQ0 139 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 PGLYRP2Q96PD5 576 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 TANC2Q9HCD6 1990 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 ADAMTS13Q76LX8 1427 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 TRAV27A0A087WT01 109 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 TLCD2A6NGC4 264 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 PMP2P02689 132 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 GUCA1AP43080 201 aaPredicted RBP3.71□□□□□ -1.82
NIPBL-204ENST00000504430 LYPD2Q6UXB3 125 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 CEND1Q8N111 149 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 OR4S1Q8NGB4 309 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 RPS4Y2Q8TD47 263 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 DPH3Q96FX2 82 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF556Q9HAH1 456 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 EPDR1Q9UM22 224 aa3.71□□□□□ -1.82
NIPBL-204ENST00000504430 NUP214P35658 2090 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 ECM29Q5VYK3 1845 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 ANAPC1Q9H1A4 1944 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 EEA1Q15075 1411 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 MDFIC2A0A1B0GVS7 189 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 ARRDC5A6NEK1 342 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 A8MWV9 139 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 EPM2AB3EWF7 344 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 H3BMG7 143 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 SLC25A5P05141 298 aaKnown RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 RPL30P62888 115 aaKnown RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 RRN3P1Q2M238 152 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 OR10G2Q8NGC3 310 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 RTN4IP1Q8WWV3 396 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 HDHD3Q9BSH5 251 aaPredicted RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 IMUPQ9GZP8 106 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 IL36BQ9NZH7 164 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 CKLFQ9UBR5 152 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 APODP05090 189 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 ARPP19P56211 112 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 TWIST1Q15672 202 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 ZNF767PQ75MW2 155 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 SPATA12Q7Z6I5 190 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 TMEM133Q9H2Q1 129 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 AK3Q9UIJ7 227 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 MCTS1Q9ULC4 181 aaKnown RBP3.7□□□□□ -1.82
NIPBL-204ENST00000504430 MED14O60244 1454 aa3.7□□□□□ -1.82
NIPBL-204ENST00000504430 IGHV3-74A0A0B4J1X5 117 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 PINLYPA6NC86 204 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 BMPR1BO00238 502 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 ATP5G2Q06055 141 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 C11orf87Q6NUJ2 197 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 SLC25A29Q8N8R3 303 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 LITAFQ99732 161 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 COMMD3Q9UBI1 195 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 CRB1P82279 1406 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 IGHV3-72A0A0B4J1Y9 119 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 A0A0G2JMM0 328 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 A0A1W2PPB8 328 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 KIR3DP1A8MWS1 328 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 UBE2L6O14933 153 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 IGLV3-25P01717 112 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 IGHV3-23P01764 117 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 ATP6V0CP27449 155 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 CXCL5P42830 114 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 SEC11CQ9BY50 192 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 FKBP11Q9NYL4 201 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 HELZP42694 1942 aaKnown RBP3.69□□□□□ -1.82
NIPBL-204ENST00000504430 IGLV7-46A0A075B6I9 117 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 SRRM5B3KS81 715 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 C9JCJ5 164 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 KLF7O75840 302 aaPredicted RBP3.69□□□□□ -1.82
NIPBL-204ENST00000504430 LY6G6DO95868 133 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 IGLV2-11P01706 119 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 KRTAP10-2P60368 255 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 LUZP6Q538Z0 58 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 CGB2Q6NT52 195 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 C18orf65Q6ZTR6 163 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 SLC25A42Q86VD7 318 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 MS4A6EQ96DS6 147 aa3.69□□□□□ -1.82
NIPBL-204ENST00000504430 MRPL32Q9BYC8 188 aaKnown RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms